RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 EFHC2Q5JST6 749 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 ZNF507Q8TCN5 953 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 SPTLC1O15269 473 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 FOXN1O15353 648 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 EMC2Q15006 297 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 ATF7IP2Q5U623 682 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 TRIM68Q6AZZ1 485 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 PLEKHH3Q7Z736 793 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 DACT3Q96B18 629 aaPredicted RBP15.3■□□□□ 0.04
TRIO-222ENST00000515144 SFMBT1Q9UHJ3 866 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 PYCARDQ9ULZ3 195 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 SCINQ9Y6U3 715 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 FGGP02679 453 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 INPP5BP32019 993 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 DR1Q01658 176 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 TWF1Q12792 350 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 WDR48Q8TAF3 677 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 SLC16A10Q8TF71 515 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 PPWD1Q96BP3 646 aaKnown RBP15.3■□□□□ 0.04
TRIO-222ENST00000515144 ETFBP38117 255 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 CAPRIN1Q14444 709 aaKnown RBP15.3■□□□□ 0.04
TRIO-222ENST00000515144 ZNF560Q96MR9 790 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 SENP2Q9HC62 589 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 DONSONQ9NYP3 566 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 F8W8V4 182 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 MT-ND3P03897 115 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 STX1BP61266 288 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 LY6KQ17RY6 165 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 SDE2Q6IQ49 451 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 TMEM39AQ9NV64 488 aa15.3■□□□□ 0.04
TRIO-222ENST00000515144 ORC4O43929 436 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 EVI5O60447 810 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 FDX1P10109 184 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 INTUQ9ULD6 942 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 RASSF3Q86WH2 238 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 AGBL3Q8NEM8 1001 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 ZNF564Q8TBZ8 553 aaPredicted RBP15.29■□□□□ 0.04
TRIO-222ENST00000515144 LRRC53A6NM62 1247 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 PRAMEP78395 509 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 RUNDC3BQ96NL0 473 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 ZRANB2O95218 330 aaKnown RBP eCLIP15.29■□□□□ 0.04
TRIO-222ENST00000515144 CYP2C8P10632 490 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 RAG1P15918 1043 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 REEP2Q9BRK0 252 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 SAYSD1Q9NPB0 183 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 MYH6P13533 1939 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 CDH6P55285 790 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 GPC5P78333 572 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 SCYL3Q8IZE3 742 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 CFAP61Q8NHU2 1237 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 TNIP3Q96KP6 325 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 SLC13A1Q9BZW2 595 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 LSM7Q9UK45 103 aaKnown RBP15.29■□□□□ 0.04
TRIO-222ENST00000515144 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.29■□□□□ 0.04
TRIO-222ENST00000515144 RWDD2BP57060 319 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 COG7P83436 770 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 HDLBPQ00341 1268 aaKnown RBP15.29■□□□□ 0.04
TRIO-222ENST00000515144 AGR3Q8TD06 166 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 INTS2Q9H0H0 1204 aaKnown RBP15.29■□□□□ 0.04
TRIO-222ENST00000515144 STAP1Q9ULZ2 295 aa15.29■□□□□ 0.04
TRIO-222ENST00000515144 ENTPD3O75355 529 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 TPI1P60174 286 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 CDK17Q00537 523 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 HEATR6Q6AI08 1181 aaKnown RBP15.28■□□□□ 0.04
TRIO-222ENST00000515144 STOX1Q6ZVD7 989 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 TUFT1Q9NNX1 390 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 HSPBP1Q9NZL4 362 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 CALB1P05937 261 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 RASA1P20936 1047 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 NCOA4Q13772 614 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 SCFD2Q8WU76 684 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 SDCCAG3Q96C92 435 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 MRPL46Q9H2W6 279 aaKnown RBP15.28■□□□□ 0.04
TRIO-222ENST00000515144 STK36Q9NRP7 1315 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 HS6ST3Q8IZP7 471 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 TMEM169Q96HH4 297 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 OGFRQ9NZT2 677 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 DCAF6Q58WW2 860 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 C10orf120Q5SQS8 335 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 NOTUMQ6P988 496 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 ADCK2Q7Z695 626 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 ERO1BQ86YB8 467 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 RNF10Q8N5U6 811 aaKnown RBP15.28■□□□□ 0.04
TRIO-222ENST00000515144 STKLD1Q8NE28 680 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 INTS9Q9NV88 658 aaKnown RBP15.28■□□□□ 0.04
TRIO-222ENST00000515144 BAIAP2L1Q9UHR4 511 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 CFLARO15519 480 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 SEC31AO94979 1220 aaKnown RBP15.28■□□□□ 0.04
TRIO-222ENST00000515144 GPS1Q13098 491 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 FBXO33Q7Z6M2 555 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 NEK9Q8TD19 979 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 GTSE1Q9NYZ3 720 aa15.28■□□□□ 0.04
TRIO-222ENST00000515144 ARL4DP49703 201 aa15.27■□□□□ 0.04
TRIO-222ENST00000515144 LAMC2Q13753 1193 aa15.27■□□□□ 0.04
TRIO-222ENST00000515144 DHX38Q92620 1227 aaKnown RBP15.27■□□□□ 0.04
TRIO-222ENST00000515144 FMO2Q99518 471 aa15.27■□□□□ 0.04
TRIO-222ENST00000515144 MYH7P12883 1935 aa15.27■□□□□ 0.04
TRIO-222ENST00000515144 CASQ2O14958 399 aaPredicted RBP15.27■□□□□ 0.04
TRIO-222ENST00000515144 B3GAT3O94766 335 aa15.27■□□□□ 0.04
TRIO-222ENST00000515144 CAP2P40123 477 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms