RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 ALDH5A1P51649 535 aaPredicted RBP8.85□□□□□ -0.99
CPNE4-211ENST00000514439 POLGP54098 1239 aaPredicted RBP8.85□□□□□ -0.99
CPNE4-211ENST00000514439 MFAP3P55082 362 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 PAK2Q13177 524 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 TAF3Q5VWG9 929 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 SV2AQ7L0J3 742 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 RIOX2Q8IUF8 465 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 HELQQ8TDG4 1101 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 CASKIN2Q8WXE0 1202 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 PCDHB18PQ96TA0 734 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 FAM213AQ9BRX8 229 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 AP1M1Q9BXS5 423 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 ACP6Q9NPH0 428 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 RAB20Q9NX57 234 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 NFU1Q9UMS0 254 aa8.85□□□□□ -0.99
CPNE4-211ENST00000514439 MAFBQ9Y5Q3 323 aaPredicted RBP8.85□□□□□ -0.99
CPNE4-211ENST00000514439 WDR81Q562E7 1941 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 ADM5C9JUS6 153 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 H0YCG3 227 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 KRIT1O00522 736 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 DDX3YO15523 660 aaKnown RBP8.84□□□□□ -0.99
CPNE4-211ENST00000514439 DDNO94850 711 aaPredicted RBP8.84□□□□□ -0.99
CPNE4-211ENST00000514439 OATP04181 439 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 UBA1P22314 1058 aaKnown RBP8.84□□□□□ -0.99
CPNE4-211ENST00000514439 GTF2H1P32780 548 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 NNTQ13423 1086 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 DCAF12L1Q5VU92 463 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 USP37Q86T82 979 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 SLC47A2Q86VL8 602 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 RHOT2Q8IXI1 618 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 TSEN2Q8NCE0 465 aaKnown RBP8.84□□□□□ -0.99
CPNE4-211ENST00000514439 IFT81Q8WYA0 676 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 TMEM143Q96AN5 459 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 ELMO3Q96BJ8 720 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 FAM84AQ96KN4 292 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 NT5C1BQ96P26 610 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 PSD3Q9NYI0 1048 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 CTTNBP2NLQ9P2B4 639 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 FBXO40Q9UH90 709 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 CSADQ9Y600 493 aa8.84□□□□□ -0.99
CPNE4-211ENST00000514439 RTN2O75298 545 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 MMEP08473 750 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 FAM153BP0C7A2 387 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 ITGA4P13612 1032 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 LMAN1P49257 510 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 LIG4P49917 911 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 HADHBP55084 474 aaKnown RBP8.83□□□□□ -1
CPNE4-211ENST00000514439 FMO1Q01740 532 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 PRPF4BQ13523 1007 aaKnown RBP8.83□□□□□ -1
CPNE4-211ENST00000514439 TRADDQ15628 312 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 FAM153CQ494X1 144 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 GADL1Q6ZQY3 521 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 ASAP3Q8TDY4 903 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 FBXO41Q8TF61 875 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 SPATC1LQ9H0A9 340 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 DDX47Q9H0S4 455 aaKnown RBP8.83□□□□□ -1
CPNE4-211ENST00000514439 DHX33Q9H6R0 707 aaKnown RBP8.83□□□□□ -1
CPNE4-211ENST00000514439 FAM204AQ9H8W3 233 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 FAM153AQ9UHL3 310 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 IGKV6D-21A0A0A0MT36 114 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 SOWAHBA6NEL2 793 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 ZNF233A6NK53 670 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 CCDC188H7C350 402 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 SART1O43290 800 aaKnown RBP8.83□□□□□ -1
CPNE4-211ENST00000514439 EXTL3O43909 919 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 GZMAP12544 262 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 CYP11B1P15538 503 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 GLRA2P23416 452 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 EDNRBP24530 442 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 ABCD1P33897 745 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 PDE6CP51160 858 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 ERVK-9P63128 1117 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 GPC5P78333 572 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 ENPEPQ07075 957 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 LMBRD2Q68DH5 695 aaPredicted RBP8.83□□□□□ -1
CPNE4-211ENST00000514439 C11orf63Q6NUN7 778 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 NCAPG2Q86XI2 1143 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 SULF1Q8IWU6 871 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 DHX38Q92620 1227 aaKnown RBP8.83□□□□□ -1
CPNE4-211ENST00000514439 TATDN2Q93075 761 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 PCYT2Q99447 389 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 PI4K2AQ9BTU6 479 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 PORCNQ9H237 461 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 CHORDC1Q9UHD1 332 aaPredicted RBP8.83□□□□□ -1
CPNE4-211ENST00000514439 TTC7AQ9ULT0 858 aaPredicted RBP8.83□□□□□ -1
CPNE4-211ENST00000514439 A0A0G2JMZ2 1700 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 PTPRFP10586 1907 aa8.83□□□□□ -1
CPNE4-211ENST00000514439 PAPPA2Q9BXP8 1791 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 LRRIQ4A6NIV6 560 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 IRF6O14896 467 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 ATMINO43313 823 aaPredicted RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 FARP2O94887 1054 aaPredicted RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 FGGP02679 453 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 STRN3Q13033 797 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 TCEAL1Q15170 157 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 C15orf39Q6ZRI6 1047 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 SLC7A3Q8WY07 619 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 ALG3Q92685 438 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 DCPSQ96C86 337 aaKnown RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 RNPC3Q96LT9 517 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms