RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 CBWD2Q8IUF1 395 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 SYN2Q92777 582 aaPredicted RBP17.38■□□□□ 0.37
NUP54-214ENST00000514307 CCDC127Q96BQ5 260 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 ZBTB45Q96K62 511 aaPredicted RBP17.38■□□□□ 0.37
NUP54-214ENST00000514307 DNAJC7Q99615 494 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 CRACR2AQ9BSW2 395 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 SEZ6LQ9BYH1 1024 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 FAM49AQ9H0Q0 323 aaPredicted RBP17.38■□□□□ 0.37
NUP54-214ENST00000514307 ADAMTS10Q9H324 1103 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 ABHD10Q9NUJ1 306 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.38■□□□□ 0.37
NUP54-214ENST00000514307 ANKFY1Q9P2R3 1169 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 FBXL5Q9UKA1 691 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 MYO6Q9UM54 1294 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 MOXD2PA6NHM9 499 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 M0QZ92 97 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 TREHO43280 583 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 ZSCAN12O43309 604 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 ZNF500O60304 480 aaPredicted RBP17.37■□□□□ 0.37
NUP54-214ENST00000514307 MCF2P10911 925 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 AXLP30530 894 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 HOXC8P31273 242 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 CRYBB1P53674 252 aaPredicted RBP17.37■□□□□ 0.37
NUP54-214ENST00000514307 IRX5P78411 483 aaPredicted RBP17.37■□□□□ 0.37
NUP54-214ENST00000514307 MYL7Q01449 175 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 KLHDC7AQ5VTJ3 777 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 KRT39Q6A163 491 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 DNAJB3Q8WWF6 145 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 ZBTB10Q96DT7 871 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 ADPGKQ9BRR6 497 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 TTYH3Q9C0H2 523 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 TMEM8AQ9HCN3 771 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 PTPRHQ9HD43 1115 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 GTF2IRD1Q9UHL9 959 aa17.37■□□□□ 0.37
NUP54-214ENST00000514307 MYADML2A6NDP7 307 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 CCDC172P0C7W6 258 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 SLC9A1P19634 815 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 EIF4BP23588 611 aaKnown RBP17.36■□□□□ 0.37
NUP54-214ENST00000514307 KLK7P49862 253 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 POLR2FP61218 127 aaKnown RBP17.36■□□□□ 0.37
NUP54-214ENST00000514307 CDK17Q00537 523 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 FAM47CQ5HY64 1035 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 CCSAPQ6IQ19 270 aaPredicted RBP17.36■□□□□ 0.37
NUP54-214ENST00000514307 RRAGAQ7L523 313 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 ZBTB33Q86T24 672 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 CCDC155Q8N6L0 562 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 FAM81BQ96LP2 452 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 AGPAT5Q9NUQ2 364 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 WBP1LQ9NX94 342 aa17.36■□□□□ 0.37
NUP54-214ENST00000514307 RBAKQ9NYW8 714 aaPredicted RBP17.36■□□□□ 0.37
NUP54-214ENST00000514307 CASP8AP2Q9UKL3 1982 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 GPR32O75388 356 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 CLTAP09496 248 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 TRIM49P0CI25 452 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 TRIM49CP0CI26 452 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 TNNI1P19237 187 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 RFX1P22670 979 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 FECHP22830 423 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 PROZP22891 400 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 HNRNPH3P31942 346 aaKnown RBP17.35■□□□□ 0.37
NUP54-214ENST00000514307 GCLMP48507 274 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 ACOT2P49753 483 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 ACLYP53396 1101 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 CLDN10P78369 228 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 NOLC1Q14978 699 aaKnown RBP eCLIP17.35■□□□□ 0.37
NUP54-214ENST00000514307 KIZQ2M2Z5 673 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 SFMBT2Q5VUG0 894 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 CATSPER4Q7RTX7 472 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 RPAINQ86UA6 219 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 ZNF668Q96K58 619 aaPredicted RBP17.35■□□□□ 0.37
NUP54-214ENST00000514307 GLT1D1Q96MS3 346 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 MINDY3Q9H8M7 445 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 KCND1Q9NSA2 647 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 GCNT4Q9P109 453 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 PYCARDQ9ULZ3 195 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 PLAGL2Q9UPG8 496 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 USP20Q9Y2K6 914 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 PTPN22Q9Y2R2 807 aa17.35■□□□□ 0.37
NUP54-214ENST00000514307 BZW2Q9Y6E2 419 aaKnown RBP17.35■□□□□ 0.37
NUP54-214ENST00000514307 A0A1B0GUA9 196 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 RNF225M0QZC1 329 aaPredicted RBP17.34■□□□□ 0.37
NUP54-214ENST00000514307 IL18RAPO95256 599 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 ADRB2P07550 413 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 DLATP10515 647 aaKnown RBP17.34■□□□□ 0.37
NUP54-214ENST00000514307 DARSP14868 501 aaKnown RBP17.34■□□□□ 0.37
NUP54-214ENST00000514307 UCHL3P15374 230 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 MXI1P50539 228 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 LBX1P52954 281 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 DLG4P78352 724 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 PPP3CAQ08209 521 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 GOLGA8FQ08AF8 430 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 GOLGA8DPQ0D2H9 430 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 ZNF568Q3ZCX4 644 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 CRELD2Q6UXH1 353 aaPredicted RBP17.34■□□□□ 0.37
NUP54-214ENST00000514307 RUFY4Q6ZNE9 571 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 CCDC170Q8IYT3 715 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 SPAG5Q96R06 1193 aa17.34■□□□□ 0.37
NUP54-214ENST00000514307 CELF4Q9BZC1 486 aaKnown RBP17.34■□□□□ 0.37
NUP54-214ENST00000514307 INTS2Q9H0H0 1204 aaKnown RBP17.34■□□□□ 0.37
NUP54-214ENST00000514307 RPF1Q9H9Y2 349 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms