RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	PCDHGA3	Q9Y5H0	932 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PCDHGA2	Q9Y5H1	932 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267		A0A0A6YYJ9	748 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	KRTAP23-1	A1A580	65 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ANO9	A1A5B4	782 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CAPN14	A8MX76	684 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MTHFD2	P13995	350 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PTX3	P26022	381 aa	Predicted RBP	4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	HIBADH	P31937	336 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MCM7	P33993	719 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	RGS3	P49796	1198 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ADK	P55263	362 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	NRG3	P56975	720 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	BPIFB4	P59827	614 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ABHD18	Q0P651	414 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ADAM15	Q13444	863 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ODF1	Q14990	250 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PDCD1	Q15116	288 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CLUL1	Q15846	466 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	TBR1	Q16650	682 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	USP39	Q53GS9	565 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	RRP12	Q5JTH9	1297 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SYCP2L	Q5T4T6	812 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	KRT40	Q6A162	431 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CLEC14A	Q86T13	490 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	UNC5B	Q8IZJ1	945 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PLA2G15	Q8NCC3	412 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PJA1	Q8NG27	643 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	FERMT2	Q96AC1	680 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MIEF2	Q96C03	454 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	RUNDC1	Q96C34	613 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	TEKT5	Q96M29	485 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ZNF341	Q9BYN7	854 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CSRNP2	Q9H175	543 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MAN1C1	Q9NR34	630 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	TLR9	Q9NR96	1032 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	C1orf112	Q9NSG2	853 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ZBTB21	Q9ULJ3	1066 aa		4.37	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PRPF6	O94906	941 aa	Known RBP	4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	AGXT	P21549	392 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ACVRL1	P37023	503 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MTNR1B	P49286	362 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MRPS9	P82933	396 aa	Known RBP	4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PTH1R	Q03431	593 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	FOXL1	Q12952	345 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CRHR2	Q13324	411 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PICALM	Q13492	652 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ARHGAP29	Q52LW3	1261 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CXorf67	Q86X51	503 aa	Predicted RBP	4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	GPR135	Q8IZ08	494 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	BCL6B	Q8N143	479 aa	Predicted RBP	4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	FAM43A	Q8N2R8	423 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	AMER2	Q8N7J2	671 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CDYL2	Q8N8U2	506 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SLC35G2	Q8TBE7	412 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	JADE3	Q92613	823 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	RAX2	Q96IS3	184 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ZNF496	Q96IT1	587 aa	Predicted RBP	4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SORCS2	Q96PQ0	1159 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MPHOSPH6	Q99547	160 aa	Known RBP	4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	TCF25	Q9BQ70	676 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MTG2	Q9H4K7	406 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	IL23A	Q9NPF7	189 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	DNAJC28	Q9NX36	388 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MSRA	Q9UJ68	235 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	GPR45	Q9Y5Y3	372 aa		4.36	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	AKAP8	O43823	692 aa	Known RBP	4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	OPHN1	O60890	802 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MFAP3L	O75121	409 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	OFD1	O75665	1012 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	LDHA	P00338	332 aa	Known RBP	4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	FSHB	P01225	129 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SLC5A3	P53794	718 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MANF	P55145	182 aa	Known RBP	4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	NPEPPS	P55786	919 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	WNT3A	P56704	352 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ATP2C1	P98194	919 aa	Predicted RBP	4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CNGB1	Q14028	1251 aa	Predicted RBP	4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MYBPC3	Q14896	1274 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ACAP2	Q15057	778 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	IFIT1B	Q5T764	474 aa	Known RBP	4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CYB5RL	Q6IPT4	315 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	FAM111B	Q6SJ93	734 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	B3GNT9	Q6UX72	402 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267		Q6ZSN1	163 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	TSHZ1	Q6ZSZ6	1077 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CHST15	Q7LFX5	561 aa	Predicted RBP	4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SRGAP1	Q7Z6B7	1085 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	C1orf210	Q8IVY1	113 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CMIP	Q8IY22	773 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	GSPT2	Q8IYD1	628 aa	Known RBP	4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MIER2	Q8N344	545 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ANKRD53	Q8N9V6	530 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SLC16A11	Q8NCK7	471 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ARL8A	Q96BM9	186 aa		4.35	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ZNF503	Q96F45	646 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms