RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SEMA4DQ92854 862 aa16.18■□□□□ 0.18
VCAN-211ENST00000513984 POP1Q99575 1024 aaKnown RBP16.18■□□□□ 0.18
VCAN-211ENST00000513984 TOPORSQ9NS56 1045 aaPredicted RBP16.18■□□□□ 0.18
VCAN-211ENST00000513984 ERAP1Q9NZ08 941 aa16.18■□□□□ 0.18
VCAN-211ENST00000513984 PUF60Q9UHX1 559 aaKnown RBP16.18■□□□□ 0.18
VCAN-211ENST00000513984 PCDHGC5Q9Y5F6 944 aa16.18■□□□□ 0.18
VCAN-211ENST00000513984 MGAMO43451 1857 aa16.18■□□□□ 0.18
VCAN-211ENST00000513984 ADGRA2Q96PE1 1338 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 A0A0B4J269 797 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 CTAGE15A4D2H0 777 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 SNAI1O95863 264 aaPredicted RBP16.17■□□□□ 0.18
VCAN-211ENST00000513984 CTAGE8P0CG41 777 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 PRLRP16471 622 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 LAMTOR4Q0VGL1 99 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 FBXO38Q6PIJ6 1188 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 CRELD2Q6UXH1 353 aaPredicted RBP16.17■□□□□ 0.18
VCAN-211ENST00000513984 SV2AQ7L0J3 742 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 PLEKHH3Q7Z736 793 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 CTAGE6Q86UF2 777 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 CTAGE4Q8IX94 777 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 GPR161Q8N6U8 529 aaKnown RBP16.17■□□□□ 0.18
VCAN-211ENST00000513984 PPTC7Q8NI37 304 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 MAML3Q96JK9 1138 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 TARS2Q9BW92 718 aaKnown RBP16.17■□□□□ 0.18
VCAN-211ENST00000513984 SNX12Q9UMY4 172 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 TRPC6Q9Y210 931 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 BUB1O43683 1085 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 MSCO60682 206 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 ITGBL1O95965 494 aaPredicted RBP16.17■□□□□ 0.18
VCAN-211ENST00000513984 LGALS2P05162 132 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 DLATP10515 647 aaKnown RBP16.17■□□□□ 0.18
VCAN-211ENST00000513984 NLRP11P59045 1033 aaKnown RBP16.17■□□□□ 0.18
VCAN-211ENST00000513984 DPP9Q86TI2 863 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 LRRC71Q8N4P6 559 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 TAS1R2Q8TE23 839 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 ZBTB45Q96K62 511 aaPredicted RBP16.17■□□□□ 0.18
VCAN-211ENST00000513984 C2orf40Q9H1Z8 148 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 SUGCTQ9HAC7 445 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 RAB20Q9NX57 234 aa16.17■□□□□ 0.18
VCAN-211ENST00000513984 ZC3H11AO75152 810 aaKnown RBP eCLIP16.16■□□□□ 0.18
VCAN-211ENST00000513984 HUNKP57058 714 aa16.16■□□□□ 0.18
VCAN-211ENST00000513984 GJC2Q5T442 439 aaPredicted RBP16.16■□□□□ 0.18
VCAN-211ENST00000513984 GLYCTKQ8IVS8 523 aa16.16■□□□□ 0.18
VCAN-211ENST00000513984 ZBTB8OSQ8IWT0 167 aa16.16■□□□□ 0.18
VCAN-211ENST00000513984 HELQQ8TDG4 1101 aa16.16■□□□□ 0.18
VCAN-211ENST00000513984 SHC3Q92529 594 aa16.16■□□□□ 0.18
VCAN-211ENST00000513984 KREMEN1Q96MU8 473 aa16.16■□□□□ 0.18
VCAN-211ENST00000513984 NT5C1BQ96P26 610 aa16.16■□□□□ 0.18
VCAN-211ENST00000513984 MSTO1Q9BUK6 570 aa16.16■□□□□ 0.18
VCAN-211ENST00000513984 MRPL4Q9BYD3 311 aaKnown RBP16.16■□□□□ 0.18
VCAN-211ENST00000513984 A0A0A6YYK5 440 aaPredicted RBP16.15■□□□□ 0.18
VCAN-211ENST00000513984 SLC15A5A6NIM6 579 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 SRGAP2O75044 1071 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 H2AFZP0C0S5 128 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 ADCYAP1R1P41586 468 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 ACOT2P49753 483 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 MFAP3P55082 362 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 CKAP4Q07065 602 aaKnown RBP16.15■□□□□ 0.18
VCAN-211ENST00000513984 ZNF484Q5JVG2 852 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 H2AFVQ71UI9 128 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 FAM71AQ8IYT1 594 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 RNF149Q8NC42 400 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 U2AF1L4Q8WU68 220 aaKnown RBP16.15■□□□□ 0.18
VCAN-211ENST00000513984 TRAPPC12Q8WVT3 735 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 KAT5Q92993 513 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 FNBP1Q96RU3 617 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 RNPEPQ9H4A4 650 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 ZCCHC17Q9NP64 241 aaKnown RBP16.15■□□□□ 0.18
VCAN-211ENST00000513984 NMRK2Q9NPI5 230 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 ANKFY1Q9P2R3 1169 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 SUCLA2Q9P2R7 463 aaPredicted RBP16.15■□□□□ 0.18
VCAN-211ENST00000513984 TSKSQ9UJT2 592 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 HYOU1Q9Y4L1 999 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 C22orf31O95567 290 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 ZSCAN20P17040 1043 aaPredicted RBP16.15■□□□□ 0.18
VCAN-211ENST00000513984 TCP1P17987 556 aaKnown RBP16.15■□□□□ 0.18
VCAN-211ENST00000513984 NAP1L1P55209 391 aaKnown RBP16.15■□□□□ 0.18
VCAN-211ENST00000513984 ZACNQ401N2 412 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 RASAL3Q86YV0 1011 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 PPM1KQ8N3J5 372 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 MSL3Q8N5Y2 521 aaKnown RBP16.15■□□□□ 0.18
VCAN-211ENST00000513984 ZNF516Q92618 1163 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 RPGRIP1Q96KN7 1286 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 AGPAT1Q99943 283 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 TINF2Q9BSI4 451 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 TLR10Q9BXR5 811 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 ABHD16BQ9H3Z7 469 aa16.15■□□□□ 0.18
VCAN-211ENST00000513984 RBAKQ9NYW8 714 aaPredicted RBP16.15■□□□□ 0.18
VCAN-211ENST00000513984 COL1A2P08123 1366 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 ASAP2O43150 1006 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 RRP9O43818 475 aaKnown RBP16.14■□□□□ 0.17
VCAN-211ENST00000513984 FAM189A1O60320 539 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 TOM1L1O75674 476 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 PALMO75781 387 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 PRKCBP05771 671 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 HOXD8P13378 290 aaPredicted RBP16.14■□□□□ 0.17
VCAN-211ENST00000513984 WNT7BP56706 349 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 GCNT1Q02742 428 aa16.14■□□□□ 0.17
VCAN-211ENST00000513984 PRPF4BQ13523 1007 aaKnown RBP16.14■□□□□ 0.17
VCAN-211ENST00000513984 TFDP1Q14186 410 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms