RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 AOC3Q16853 763 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 NSMFQ6X4W1 530 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 ZC3H18Q86VM9 953 aaKnown RBP10.33□□□□□ -0.76
VCAN-210ENST00000513960 EIF2AK1Q9BQI3 630 aaKnown RBP10.33□□□□□ -0.76
VCAN-210ENST00000513960 PAPOLBQ9NRJ5 636 aaKnown RBP10.33□□□□□ -0.76
VCAN-210ENST00000513960 PRR12Q9ULL5 1215 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 POC1B-GALNT4F8VUJ3 575 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 CHMP2AO43633 222 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 ATP4AP20648 1035 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 SPIRE1Q08AE8 756 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 C10orf76Q5T2E6 689 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 CRELD2Q6UXH1 353 aaPredicted RBP10.33□□□□□ -0.76
VCAN-210ENST00000513960 NT5DC3Q86UY8 548 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 TPH2Q8IWU9 490 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 DTX3LQ8TDB6 740 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 EBF2Q9HAK2 575 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 RGL1Q9NZL6 768 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 TRAF3IP3Q9Y228 551 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 ANKRD62A6NC57 917 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 RBAK-RBAKDNI3L0D1 243 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 ATMINO43313 823 aaPredicted RBP10.33□□□□□ -0.76
VCAN-210ENST00000513960 MYBP10242 640 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 TAL1P17542 331 aaPredicted RBP10.33□□□□□ -0.76
VCAN-210ENST00000513960 KRT15P19012 456 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 RWDD2BP57060 319 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 GBP7Q8N8V2 638 aaPredicted RBP10.33□□□□□ -0.76
VCAN-210ENST00000513960 CYP2W1Q8TAV3 490 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 C1orf54Q8WWF1 131 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 ZNF317Q96PQ6 595 aaPredicted RBP10.33□□□□□ -0.76
VCAN-210ENST00000513960 P2RX7Q99572 595 aaKnown RBP10.33□□□□□ -0.76
VCAN-210ENST00000513960 TYW1Q9NV66 732 aaKnown RBP10.33□□□□□ -0.76
VCAN-210ENST00000513960 ETAA1Q9NY74 926 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 AIPL1Q9NZN9 384 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 SLC12A4Q9UP95 1085 aa10.33□□□□□ -0.76
VCAN-210ENST00000513960 LTBP1Q14766 1721 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 EYA4O95677 639 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 GH1P01241 217 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 NR3C1P04150 777 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 CIITAP33076 1130 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 RPL21P46778 160 aaKnown RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 MYCT1Q8N699 235 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 C1orf131Q8NDD1 294 aaKnown RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 CRYGNQ8WXF5 182 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 CNKSR1Q969H4 720 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 LENG9Q96B70 501 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 FAM118BQ9BPY3 351 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 VCXQ9H320 206 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 EHMT1Q9H9B1 1298 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 SUCLA2Q9P2R7 463 aaPredicted RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 RSPH10B2B2RC85 870 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 TCP10L2B9ZVM9 353 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 PAEPP09466 180 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 RSPH10BP0C881 870 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 DLATP10515 647 aaKnown RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 GAP43P17677 238 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 ATP5DP30049 168 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 ALDH3A1P30838 453 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 CASP4P49662 377 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 PAPOLAP51003 745 aaKnown RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 ZRSR2Q15696 482 aaKnown RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 CNGA2Q16280 664 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 KYNUQ16719 465 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 CCDC174Q6PII3 467 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 SYCP3Q8IZU3 236 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 MAB21L3Q8N8X9 362 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 PIGOQ8TEQ8 1089 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 ATXN2LQ8WWM7 1075 aaKnown RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 TLCD1Q96CP7 247 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 PRMT6Q96LA8 375 aaPredicted RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 POP1Q99575 1024 aaKnown RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 POLR3CQ9BUI4 534 aaPredicted RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 METTL5Q9NRN9 209 aaKnown RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 TXLNGQ9NUQ3 528 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 ADAM22Q9P0K1 906 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 PARP2Q9UGN5 583 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 DNAJC12Q9UKB3 198 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 PASKQ96RG2 1323 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 DPPA5A6NC42 116 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 DDX3XO00571 662 aaKnown RBP eCLIP10.32□□□□□ -0.76
VCAN-210ENST00000513960 PPFIA2O75334 1257 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 SMNDC1O75940 238 aaKnown RBP eCLIP10.32□□□□□ -0.76
VCAN-210ENST00000513960 TRIM49P0CI25 452 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 TRIM49CP0CI26 452 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 FERP16591 822 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 ADCY8P40145 1251 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 MMP13P45452 471 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 MAPK7Q13164 816 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 DNAJC3Q13217 504 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 CTTNQ14247 550 aaKnown RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 DRAP1Q14919 205 aaPredicted RBP10.32□□□□□ -0.76
VCAN-210ENST00000513960 STYK1Q6J9G0 422 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 GSTA5Q7RTV2 222 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 RMDN2Q96LZ7 410 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 THAP2Q9H0W7 228 aa10.32□□□□□ -0.76
VCAN-210ENST00000513960 POLR2MP0CAP2 368 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 PON1P27169 355 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 RFC5P40937 340 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 GRIK3Q13003 919 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 RCN2Q14257 317 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 EMC10Q5UCC4 262 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms