RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 GPRC5CQ9NQ84 441 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 SPTLC3Q9NUV7 552 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 PLAGL2Q9UPG8 496 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 TELO2Q9Y4R8 837 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 NRCAMQ92823 1304 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 MYH11P35749 1972 aa10.77□□□□□ -0.68
TPM3-221ENST00000513769 PLXNB2O15031 1838 aa10.77□□□□□ -0.68
TPM3-221ENST00000513769 TMEM150BA6NC51 233 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 GOLGA6L9A6NEM1 432 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 FAM187AA6NFU0 413 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 KIF2AO00139 706 aaPredicted RBP10.77□□□□□ -0.69
TPM3-221ENST00000513769 CLIC2O15247 247 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 ZEB2O60315 1214 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 GYPCP04921 128 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 MMP3P08254 477 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 GNAT1P11488 350 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 INSRRP14616 1297 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 CYP2B6P20813 491 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 KLRC1P26715 233 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 KRT9P35527 623 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 USP46P62068 366 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 KCNMA1Q12791 1236 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 FOXC1Q12948 553 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 SYCP1Q15431 976 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 FAM187BQ17R55 369 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 CEP135Q66GS9 1140 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 CYP26C1Q6V0L0 522 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 GBP6Q6ZN66 633 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 ZBTB8OSQ8IWT0 167 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 CCDC170Q8IYT3 715 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 NEK11Q8NG66 645 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 SLC35C1Q96A29 364 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 FAM81BQ96LP2 452 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 MFSD14AQ96MC6 490 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 DNAJC7Q99615 494 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 SH2D3AQ9BRG2 576 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 TTYH3Q9C0H2 523 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 SPC25Q9HBM1 224 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 SUCLA2Q9P2R7 463 aaPredicted RBP10.77□□□□□ -0.69
TPM3-221ENST00000513769 ZHX1Q9UKY1 873 aaPredicted RBP10.77□□□□□ -0.69
TPM3-221ENST00000513769 SIK3Q9Y2K2 1263 aa10.77□□□□□ -0.69
TPM3-221ENST00000513769 BZW2Q9Y6E2 419 aaKnown RBP10.77□□□□□ -0.69
TPM3-221ENST00000513769 PDE4DIPQ5VU43 2346 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 TNRC18O15417 2968 aaPredicted RBP10.76□□□□□ -0.69
TPM3-221ENST00000513769 TTC26A0AVF1 554 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 ZNF233A6NK53 670 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 MFAP3LO75121 409 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 TBC1D8O95759 1140 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 RFX1P22670 979 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 AP3M2P53677 418 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 ADKP55263 362 aaKnown RBP10.76□□□□□ -0.69
TPM3-221ENST00000513769 GJA9P57773 515 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 PTENP60484 403 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 CLDN10P78369 228 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 LAMTOR4Q0VGL1 99 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 BFSP1Q12934 665 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 SURF1Q15526 300 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 MAPK6Q16659 721 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 KYAT1Q16773 422 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 EXOC3L4Q17RC7 722 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 CDCA2Q69YH5 1023 aaPredicted RBP10.76□□□□□ -0.69
TPM3-221ENST00000513769 ZNF296Q8WUU4 475 aaPredicted RBP10.76□□□□□ -0.69
TPM3-221ENST00000513769 CPLX3Q8WVH0 158 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 TMEM143Q96AN5 459 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 EEF2KMTQ96G04 330 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 PRIMPOLQ96LW4 560 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 PCMTD1Q96MG8 357 aaPredicted RBP10.76□□□□□ -0.69
TPM3-221ENST00000513769 FZD8Q9H461 694 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 MMRN2Q9H8L6 949 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 SUGCTQ9HAC7 445 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 ABHD10Q9NUJ1 306 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 HSPBP1Q9NZL4 362 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 FLRT1Q9NZU1 646 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 CEP72Q9P209 647 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 ZMYM2Q9UBW7 1377 aa10.76□□□□□ -0.69
TPM3-221ENST00000513769 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.75□□□□□ -0.69
TPM3-221ENST00000513769 HAS3O00219 553 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 ACKR2O00590 384 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 HOXA2O43364 376 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 EXTL3O43909 919 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 SORBS3O60504 671 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 TOM1L1O75674 476 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 CCDC172P0C7W6 258 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 ADSSP30520 456 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 CASP4P49662 377 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 FLT3LGP49771 235 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 LIG4P49917 911 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 FXR1P51114 621 aaKnown RBP eCLIP10.75□□□□□ -0.69
TPM3-221ENST00000513769 VAMP7P51809 220 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 NCBP1Q09161 790 aaKnown RBP10.75□□□□□ -0.69
TPM3-221ENST00000513769 LRMPQ12912 555 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 MEA1Q16626 185 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 MTHFD1LQ6UB35 978 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 ZNF662Q6ZS27 426 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 FAM43BQ6ZT52 329 aaPredicted RBP10.75□□□□□ -0.69
TPM3-221ENST00000513769 SRGAP1Q7Z6B7 1085 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 ZNF410Q86VK4 478 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 TMEM139Q8IV31 216 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 GPD1LQ8N335 351 aa10.75□□□□□ -0.69
TPM3-221ENST00000513769 LINC01465Q8N7H1 131 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 250.8 ms