RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 CEP89Q96ST8 783 aa10.1□□□□□ -0.79
CAST-239ENST00000513666 PRMT8Q9NR22 394 aaPredicted RBP10.1□□□□□ -0.79
CAST-239ENST00000513666 AGPAT5Q9NUQ2 364 aa10.1□□□□□ -0.79
CAST-239ENST00000513666 RBM8AQ9Y5S9 174 aaKnown RBP10.1□□□□□ -0.79
CAST-239ENST00000513666 SGSM2O43147 1006 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 TGM5O43548 720 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 ZMYND10O75800 440 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 POMCP01189 267 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 IGHDP01880 384 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 FSHRP23945 695 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 RPS9P46781 194 aaKnown RBP10.09□□□□□ -0.79
CAST-239ENST00000513666 PFKPQ01813 784 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 AAMPQ13685 434 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 PRR16Q569H4 304 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 ZBTB41Q5SVQ8 909 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 TTC22Q5TAA0 569 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 LILRA6Q6PI73 481 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 MTSS1LQ765P7 747 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 COLGALT2Q8IYK4 626 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 GPR65Q8IYL9 337 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 LENG9Q96B70 501 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 NIFKQ9BYG3 293 aaKnown RBP10.09□□□□□ -0.79
CAST-239ENST00000513666 FAM126AQ9BYI3 521 aaPredicted RBP10.09□□□□□ -0.79
CAST-239ENST00000513666 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.09□□□□□ -0.79
CAST-239ENST00000513666 CHST7Q9NS84 486 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 RBM28Q9NW13 759 aaKnown RBP10.09□□□□□ -0.79
CAST-239ENST00000513666 FNIP2Q9P278 1114 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 CDH7Q9ULB5 785 aa10.09□□□□□ -0.79
CAST-239ENST00000513666 V9GY48 417 aaPredicted RBP10.09□□□□□ -0.79
CAST-239ENST00000513666 CD72P21854 359 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 SFNP31947 248 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 CIITAP33076 1130 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 OR1G1P47890 313 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 JAK3P52333 1124 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 DSC1Q08554 894 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 SPEM2Q0P670 501 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 MTERF2Q49AM1 385 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 ADGRD1Q6QNK2 874 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 TSSK4Q6SA08 328 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 SYNE3Q6ZMZ3 975 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 RHPN2Q8IUC4 686 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 MBOAT7Q96N66 472 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 NELL2Q99435 816 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 LRRC2Q9BYS8 371 aa10.08□□□□□ -0.8
CAST-239ENST00000513666 SUCLA2Q9P2R7 463 aaPredicted RBP10.08□□□□□ -0.8
CAST-239ENST00000513666 SEPT9Q9UHD8 586 aaPredicted RBP10.08□□□□□ -0.8
CAST-239ENST00000513666 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.08□□□□□ -0.8
CAST-239ENST00000513666 NCAM2O15394 837 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 LRP3O75074 770 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 STBD1O95210 358 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 NCLP19338 710 aaKnown RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 TARSP26639 723 aaKnown RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 FOSBP53539 338 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 XKR3Q5GH77 459 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 UBXN11Q5T124 520 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 DIEXFQ68CQ4 756 aaKnown RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 LAIR1Q6GTX8 287 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 APOA5Q6Q788 366 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 GRASPQ7Z6J2 395 aaPredicted RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 GLYCTKQ8IVS8 523 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 KSR1Q8IVT5 923 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 EXOC6Q8TAG9 804 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 FGF13Q92913 245 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 NLRP4Q96MN2 994 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 RIT2Q99578 217 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 IFT122Q9HBG6 1241 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 UBN1Q9NPG3 1134 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 RTN4Q9NQC3 1192 aaKnown RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 RALYQ9UKM9 306 aaKnown RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 RAB23Q9ULC3 237 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 TDRD15B5MCY1 1934 aaKnown RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 ESYT2A0FGR8 921 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 TMEM150BA6NC51 233 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 F8W810 466 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 ADAMTS3O15072 1205 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 MSH4O15457 936 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 HRO43593 1189 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 CHMP2AO43633 222 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 MAFO75444 373 aaPredicted RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 HNRNPA1P09651 372 aaKnown RBP eCLIP10.07□□□□□ -0.8
CAST-239ENST00000513666 TDGF1P13385 188 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 HOXA11P31270 313 aaPredicted RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 NTHL1P78549 312 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 CREMQ03060 361 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 FZD5Q13467 585 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 RTN1Q16799 776 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 USP41Q3LFD5 358 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 DMRTA1Q5VZB9 504 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 TPRG1Q6ZUI0 275 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 REXO1Q8N1G1 1221 aaKnown RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
CAST-239ENST00000513666 CNNM3Q8NE01 707 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 RDM1Q8NG50 284 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 B3GALT6Q96L58 329 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 KXD1Q9BQD3 176 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 SH2D3AQ9BRG2 576 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 PHF20Q9BVI0 1012 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 TEKT3Q9BXF9 490 aa10.07□□□□□ -0.8
CAST-239ENST00000513666 ZMYND12Q9H0C1 365 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms