RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 TCHHQ07283 1943 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 DGAT1O75907 488 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 SRGAP2CP0DJJ0 459 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 HOXA11P31270 313 aaPredicted RBP10.92□□□□□ -0.66
CCL28-203ENST00000513525 TXKP42681 527 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 ALDH7A1P49419 539 aaKnown RBP10.92□□□□□ -0.66
CCL28-203ENST00000513525 RARRES1P49788 294 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 BCAR1P56945 870 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 PLPP4Q5VZY2 271 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 GLB1LQ6UWU2 654 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 MRPL10Q7Z7H8 261 aaKnown RBP10.92□□□□□ -0.66
CCL28-203ENST00000513525 RNF149Q8NC42 400 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 VN1R2Q8NFZ6 395 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 LPPQ93052 612 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 EPAS1Q99814 870 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 NFKBIZQ9BYH8 718 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 PANK2Q9BZ23 570 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 RBSNQ9H1K0 784 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 FOXP1Q9H334 677 aaPredicted RBP10.92□□□□□ -0.66
CCL28-203ENST00000513525 ENTPD7Q9NQZ7 604 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 TBC1D13Q9NVG8 400 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 BARX2Q9UMQ3 279 aaPredicted RBP10.92□□□□□ -0.66
CCL28-203ENST00000513525 CNTNAP2Q9UHC6 1331 aa10.92□□□□□ -0.66
CCL28-203ENST00000513525 PDCD11Q14690 1871 aaKnown RBP10.92□□□□□ -0.66
CCL28-203ENST00000513525 MEIS3P2A8K0S8 358 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 PER2O15055 1255 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 DCXO43602 365 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 OFD1O75665 1012 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 YEATS4O95619 227 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 SRGAP2BP0DMP2 458 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 AXLP30530 894 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 PTENP60484 403 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 CCDC173Q0VFZ6 552 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 SMC1AQ14683 1233 aaKnown RBP10.91□□□□□ -0.66
CCL28-203ENST00000513525 NOMO2Q5JPE7 1267 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 UBXN11Q5T124 520 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 AGMOQ6ZNB7 445 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 TMC7Q7Z402 723 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 CNNM3Q8NE01 707 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 TMEM169Q96HH4 297 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 PPP1R9BQ96SB3 815 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 TMEM60Q9H2L4 133 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 NRDE2Q9H7Z3 1164 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 TUFT1Q9NNX1 390 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 PCDHB2Q9Y5E7 798 aa10.91□□□□□ -0.66
CCL28-203ENST00000513525 KMT2EQ8IZD2 1858 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 HIDE1A8MVS5 230 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 PRR33A8MZF0 331 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 ZC3H11AO75152 810 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCL28-203ENST00000513525 ERLIN2O94905 339 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 SPATA31C1P0DKV0 1188 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 MCM7P33993 719 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 ARL2P36404 184 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 GUCY1B3Q02153 619 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 CAPSQ13938 189 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 TFDP1Q14186 410 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 UVSSAQ2YD98 709 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 MRPL43Q8N983 215 aaKnown RBP10.9□□□□□ -0.66
CCL28-203ENST00000513525 KCNG4Q8TDN1 519 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 SUSD6Q92537 303 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 CCDC51Q96ER9 411 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 USP28Q96RU2 1077 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 ZBP1Q9H171 429 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 NUP62CLQ9H1M0 184 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 RSAD1Q9HA92 442 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 USP15Q9Y4E8 981 aaPredicted RBP10.9□□□□□ -0.66
CCL28-203ENST00000513525 ARIH1Q9Y4X5 557 aaPredicted RBP10.9□□□□□ -0.66
CCL28-203ENST00000513525 IRAK3Q9Y616 596 aa10.9□□□□□ -0.66
CCL28-203ENST00000513525 C2orf71A6NGG8 1288 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 LOC730098B7Z3J9 87 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 NT5C1B-RDH14C9J2C7 533 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 INPPL1O15357 1258 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 TSPAN1O60635 241 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 GALTP07902 379 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 HOXB8P17481 243 aaPredicted RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 MUTP22033 750 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 TRAPPC10P48553 1259 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 RBM10P98175 930 aaKnown RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 BMS1Q14692 1282 aaKnown RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 CBX2Q14781 532 aaPredicted RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 LONRF3Q496Y0 759 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 HERC4Q5GLZ8 1057 aaPredicted RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 ANKRD54Q6NXT1 300 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 NOTUMQ6P988 496 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 DDX53Q86TM3 631 aaKnown RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 TMEM173Q86WV6 379 aaPredicted RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 CATSPER3Q86XQ3 398 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 URGCPQ8TCY9 931 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 ASAP3Q8TDY4 903 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 PIGOQ8TEQ8 1089 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 IGSF21Q96ID5 467 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 CCDC43Q96MW1 224 aaKnown RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 TMEM175Q9BSA9 504 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 POLR3CQ9BUI4 534 aaPredicted RBP10.89□□□□□ -0.67
CCL28-203ENST00000513525 CLSTN2Q9H4D0 955 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 UBN1Q9NPG3 1134 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 KANSL3Q9P2N6 904 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 STK39Q9UEW8 545 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 RAPGEFL1Q9UHV5 662 aa10.89□□□□□ -0.67
CCL28-203ENST00000513525 DBR1Q9UK59 544 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms