RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 NAT10Q9H0A0 1025 aaKnown RBP17.19■□□□□ 0.34
SH3TC1-223ENST00000513495 CDT1Q9H211 546 aa17.19■□□□□ 0.34
SH3TC1-223ENST00000513495 ELAC1Q9H777 363 aaKnown RBP17.19■□□□□ 0.34
SH3TC1-223ENST00000513495 KIAA1586Q9HCI6 787 aa17.19■□□□□ 0.34
SH3TC1-223ENST00000513495 PTPRHQ9HD43 1115 aa17.19■□□□□ 0.34
SH3TC1-223ENST00000513495 UBN1Q9NPG3 1134 aa17.19■□□□□ 0.34
SH3TC1-223ENST00000513495 AGPAT3Q9NRZ7 376 aa17.19■□□□□ 0.34
SH3TC1-223ENST00000513495 TMEM161AQ9NX61 479 aa17.19■□□□□ 0.34
SH3TC1-223ENST00000513495 AGO2Q9UKV8 859 aaKnown RBP17.19■□□□□ 0.34
SH3TC1-223ENST00000513495 CEP290O15078 2479 aa17.19■□□□□ 0.34
SH3TC1-223ENST00000513495 ZMYM2Q9UBW7 1377 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 A0A0B4J269 797 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 ANKRD63C9JTQ0 380 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 OGTO15294 1046 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 ZNF623O75123 536 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 ITGA4P13612 1032 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 HOXD13P35453 343 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 WDR5P61964 334 aaKnown RBP17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 LRRC63Q05C16 580 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 PAK1Q13153 545 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 ECHDC2Q86YB7 292 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 NOC3LQ8WTT2 800 aaKnown RBP17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 RSPH1Q8WYR4 309 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 P2RX5Q93086 422 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 VWCEQ96DN2 955 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 KCTD10Q9H3F6 313 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 TOPORSQ9NS56 1045 aaPredicted RBP17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 IPPQ9Y573 584 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 STYXL1Q9Y6J8 313 aa17.18■□□□□ 0.34
SH3TC1-223ENST00000513495 SYCE3A1L190 88 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 CLTAP09496 248 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 BMP6P22004 513 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 CCNE1P24864 410 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 BMP8BP34820 402 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 GRM5P41594 1212 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 FAM189BP81408 668 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 MYBPC2Q14324 1141 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 TCTN1Q2MV58 587 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 EDRF1Q3B7T1 1238 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 UBXN11Q5T124 520 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 SLC39A4Q6P5W5 647 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 RTN4RL1Q86UN2 441 aaPredicted RBP17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 THNSL1Q8IYQ7 743 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 PHOSPHO2Q8TCD6 241 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 NELFBQ8WX92 580 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 LINC01599Q8WXQ3 324 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 ZBTB45Q96K62 511 aaPredicted RBP17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 ACAP3Q96P50 834 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 ZBED2Q9BTP6 218 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 ANP32EQ9BTT0 268 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 APOL6Q9BWW8 343 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 PCDH10Q9P2E7 1040 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 PARP2Q9UGN5 583 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 CTNND2Q9UQB3 1225 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 TRAF3IP3Q9Y228 551 aa17.17■□□□□ 0.34
SH3TC1-223ENST00000513495 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 PPP1R3GB7ZBB8 358 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 TGFB1I1O43294 461 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 EXTL3O43909 919 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 EXOC3O60645 756 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 FGFR1OPO95684 399 aaKnown RBP17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 NR3C1P04150 777 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 ATP2A2P16615 1042 aaKnown RBP17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 ERCC5P28715 1186 aaPredicted RBP17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 CYP2J2P51589 502 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 TYRO3Q06418 890 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 TPD52L1Q16890 204 aaPredicted RBP17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 DPCR1Q3MIW9 517 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 ZSCAN23Q3MJ62 389 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 CENPPQ6IPU0 288 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 GLB1LQ6UWU2 654 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 MRPL10Q7Z7H8 261 aaKnown RBP17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 C12orf56Q8IXR9 622 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 GPD1LQ8N335 351 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 XXYLT1Q8NBI6 393 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 NXF3Q9H4D5 531 aaKnown RBP17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 HSPBP1Q9NZL4 362 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 RWDD2AQ9UIY3 292 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 FRMD4BQ9Y2L6 1034 aa17.16■□□□□ 0.34
SH3TC1-223ENST00000513495 TISP43B9A030 160 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 ABLIM1O14639 778 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 CETN3O15182 167 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 CLIC2O15247 247 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 UPP2O95045 317 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 NR2F2P24468 414 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 OSTNP61366 133 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 FKBP3Q00688 224 aaKnown RBP17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 SHHQ15465 462 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 FOXR2Q6PJQ5 311 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 SLC9A9Q8IVB4 645 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 SMG8Q8ND04 991 aaKnown RBP17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 URGCPQ8TCY9 931 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 RPS6KC1Q96S38 1066 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 CBWD1Q9BRT8 395 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 FAM213AQ9BRX8 229 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 PCIF1Q9H4Z3 704 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 RPF1Q9H9Y2 349 aaKnown RBP17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 RSAD1Q9HA92 442 aa17.15■□□□□ 0.34
SH3TC1-223ENST00000513495 GIT1Q9Y2X7 761 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms