RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ZNF658Q5TYW1 1059 aaPredicted RBP8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 ZPBP2Q6X784 338 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 RBM43Q6ZSC3 357 aaKnown RBP8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 EPM2AIP1Q7L775 607 aaPredicted RBP8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 PACS2Q86VP3 889 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 KIAA0895Q8NCT3 520 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 HPS3Q969F9 1004 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 VWCEQ96DN2 955 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 BICD1Q96G01 975 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 ADPGKQ9BRR6 497 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 FGFBP2Q9BYJ0 223 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 MTIF3Q9H2K0 278 aaKnown RBP8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 TMX1Q9H3N1 280 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 TMEM206Q9H813 350 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 SLC39A2Q9NP94 309 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 C1orf112Q9NSG2 853 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 MAN1B1Q9UKM7 699 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 TNFSF13BQ9Y275 285 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 COL4A6Q14031 1691 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 SCN1AP35498 2009 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 A0A1B0GUA9 196 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 H0YGN5 161 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 B4GALT5O43286 388 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 MGEA5O60502 916 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 TOM1L1O75674 476 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 PRPF6O94906 941 aaKnown RBP8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 FGBP02675 491 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 EDN1P05305 212 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 ACRP10323 421 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 SKIP12755 728 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 HOXA11P31270 313 aaPredicted RBP8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 LIG4P49917 911 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 RAB27AP51159 221 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 STK4Q13043 487 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 STIM1Q13586 685 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 DSC3Q14574 896 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 DCAF4L1Q3SXM0 396 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 ZNF568Q3ZCX4 644 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 COBLL1Q53SF7 1204 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 TMEM240Q5SV17 173 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 ATF7IP2Q5U623 682 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 TWF2Q6IBS0 349 aaKnown RBP8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 CAVIN1Q6NZI2 390 aaKnown RBP8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 SLC27A1Q6PCB7 646 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 ZNF365Q70YC5 407 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 APBB1IPQ7Z5R6 666 aaPredicted RBP8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 SPNS2Q8IVW8 549 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 MYOCDQ8IZQ8 938 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 GUF1Q8N442 669 aaKnown RBP8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 GLIS3Q8NEA6 775 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 ZNF507Q8TCN5 953 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 SCFD1Q8WVM8 642 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 LINC01599Q8WXQ3 324 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 CPB2Q96IY4 423 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 ACCSQ96QU6 501 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 ACO2Q99798 780 aaKnown RBP8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 ADAM2Q99965 735 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 GDF15Q99988 308 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.31□□□□□ -1.086e-7■■■■□ 19.4
HMGXB3-204ENST00000513318 TARS2Q9BW92 718 aaKnown RBP8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 TRAIPQ9BWF2 469 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 PDZD7Q9H5P4 517 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 RGS18Q9NS28 235 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 TMEM63CQ9P1W3 806 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 GDAQ9Y2T3 454 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 PLXNA4Q9HCM2 1894 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 ZMYM2Q9UBW7 1377 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 ATG2AQ2TAZ0 1938 aa8.31□□□□□ -1.08
HMGXB3-204ENST00000513318 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 C9IYK1 514 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 SMAPO00193 183 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 PROZP22891 400 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 BMP8BP34820 402 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 KCNJ6P48051 423 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 EPHB4P54760 987 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 WDR5P61964 334 aaKnown RBP8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 SNRPFP62306 86 aaKnown RBP8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 KCNA1Q09470 495 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 MORC3Q14149 939 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 NOLC1Q14978 699 aaKnown RBP eCLIP8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 KNOP1Q1ED39 458 aaKnown RBP8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 TCTN1Q2MV58 587 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 SLFN12LQ6IEE8 588 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 MPZL3Q6UWV2 235 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 SLC24A5Q71RS6 500 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 C16orf59Q7L2K0 433 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 HS2ST1Q7LGA3 356 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 OTOP2Q7RTS6 562 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 HACE1Q8IYU2 909 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 SYCP3Q8IZU3 236 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 HERVK_113Q902F9 699 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 TATDN2Q93075 761 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 SLC9A7Q96T83 725 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 TRIM6Q9C030 488 aaPredicted RBP8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 UBE2OQ9C0C9 1292 aaKnown RBP8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 GBP3Q9H0R5 595 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 FAM105AQ9NUU6 356 aa8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 TYW1Q9NV66 732 aaKnown RBP8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 CGNQ9P2M7 1197 aaKnown RBP8.3□□□□□ -1.08
HMGXB3-204ENST00000513318 ANKFY1Q9P2R3 1169 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms