RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 COL1A2P08123 1366 aa6.65□□□□□ -1.35
GYPB-213ENST00000513128 DENND3A2RUS2 1198 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 FAM221BA6H8Z2 402 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 TMEM150BA6NC51 233 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 TMEM221A6NGB7 291 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 M0R296 226 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 ZNF862O60290 1169 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 TNFRSF21O75509 655 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 CSDE1O75534 798 aaKnown RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 SSBP05455 408 aaKnown RBP eCLIP6.64□□□□□ -1.35
GYPB-213ENST00000513128 PCSK2P16519 638 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 FGFR4P22455 802 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 SP100P23497 879 aaPredicted RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 CRYBB1P53674 252 aaPredicted RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 VCPP55072 806 aaKnown RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 NLRP11P59045 1033 aaKnown RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 ZXDAP98168 799 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 DHX9Q08211 1270 aaKnown RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 TCF15Q12870 199 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 AP3B2Q13367 1082 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 DRP2Q13474 957 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 UGCGQ16739 394 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 PFKFB3Q16875 520 aaPredicted RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 PRR16Q569H4 304 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 ZNF484Q5JVG2 852 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 CLLU1OSQ5K130 101 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 PLA2G2CQ5R387 149 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 SPOUT1Q5T280 376 aaKnown RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 RNF187Q5TA31 235 aaPredicted RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 PLPP4Q5VZY2 271 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 FAM160B1Q5W0V3 765 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 MIS18BP1Q6P0N0 1132 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 SYCE2Q6PIF2 218 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 NXPE4Q6UWF7 544 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 SYNE3Q6ZMZ3 975 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 ANKS3Q6ZW76 656 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 BMP8AQ7Z5Y6 402 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 THNSL1Q8IYQ7 743 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 LRRC71Q8N4P6 559 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 METTL13Q8N6R0 699 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 KDF1Q8NAX2 398 aaPredicted RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 TNPO1Q92973 898 aaKnown RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 CASD1Q96PB1 797 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 ZNF577Q9BSK1 485 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 ADAMTS10Q9H324 1103 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 SMOC2Q9H3U7 446 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 IL21Q9HBE4 155 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 METTL14Q9HCE5 456 aaKnown RBP6.64□□□□□ -1.35
GYPB-213ENST00000513128 NPHS2Q9NP85 383 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 C1orf112Q9NSG2 853 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 TMEM161AQ9NX61 479 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 GABBR1Q9UBS5 961 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 PCDHB12Q9Y5F1 795 aa6.64□□□□□ -1.35
GYPB-213ENST00000513128 ESYT2A0FGR8 921 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 GIPC1O14908 333 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 KLF4O43474 513 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 PDGFBP01127 241 aaPredicted RBP6.63□□□□□ -1.35
GYPB-213ENST00000513128 NEFLP07196 543 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 ATF7P17544 494 aaPredicted RBP6.63□□□□□ -1.35
GYPB-213ENST00000513128 TXLNAP40222 546 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 PLXNA3P51805 1871 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 UBE3AQ05086 875 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 NTRK3Q16288 839 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 BMP2KLQ5H9B9 411 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 EFCAB12Q6NXP0 572 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 ANKRD54Q6NXT1 300 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 KANK3Q6NY19 840 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 LLGL2Q6P1M3 1020 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 KCNT2Q6UVM3 1135 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 TMEM184AQ6ZMB5 413 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 TMEM173Q86WV6 379 aaPredicted RBP6.63□□□□□ -1.35
GYPB-213ENST00000513128 CCDC116Q8IYX3 515 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 REXO1Q8N1G1 1221 aaKnown RBP6.63□□□□□ -1.35
GYPB-213ENST00000513128 HNRNPLLQ8WVV9 542 aaKnown RBP6.63□□□□□ -1.35
GYPB-213ENST00000513128 MRPS27Q92552 414 aaKnown RBP6.63□□□□□ -1.35
GYPB-213ENST00000513128 PHKBQ93100 1093 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 PPP2R3CQ969Q6 453 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 ASIC4Q96FT7 647 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 SEC16BQ96JE7 1060 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 MFSD14AQ96MC6 490 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 SRPK1Q96SB4 655 aaKnown RBP6.63□□□□□ -1.35
GYPB-213ENST00000513128 TCF25Q9BQ70 676 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 SH2D3AQ9BRG2 576 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 TRIM56Q9BRZ2 755 aaKnown RBP6.63□□□□□ -1.35
GYPB-213ENST00000513128 SPON2Q9BUD6 331 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 PHF7Q9BWX1 381 aaPredicted RBP6.63□□□□□ -1.35
GYPB-213ENST00000513128 ZMYND12Q9H0C1 365 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 TMEM117Q9H0C3 514 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 KCNH6Q9H252 994 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 ELAC1Q9H777 363 aaKnown RBP6.63□□□□□ -1.35
GYPB-213ENST00000513128 ATP6V0A4Q9HBG4 840 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 SNTG2Q9NY99 539 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 NAP1L2Q9ULW6 460 aaPredicted RBP6.63□□□□□ -1.35
GYPB-213ENST00000513128 USP20Q9Y2K6 914 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 PCDHA10Q9Y5I2 948 aa6.63□□□□□ -1.35
GYPB-213ENST00000513128 MYO10Q9HD67 2058 aa6.62□□□□□ -1.35
GYPB-213ENST00000513128 DENND4AQ7Z401 1863 aa6.62□□□□□ -1.35
GYPB-213ENST00000513128 NID2Q14112 1375 aa6.62□□□□□ -1.35
GYPB-213ENST00000513128 MEIS3P2A8K0S8 358 aa6.62□□□□□ -1.35
GYPB-213ENST00000513128 NT5C1B-RDH14C9J2C7 533 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms