RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 ARHGAP8P85298 464 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 CSTF1Q05048 431 aaKnown RBP11.65□□□□□ -0.54
PFDN1-205ENST00000512925 DSC1Q08554 894 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 ANO5Q75V66 913 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 REXO1Q8N1G1 1221 aaKnown RBP11.65□□□□□ -0.54
PFDN1-205ENST00000512925 SMG8Q8ND04 991 aaKnown RBP11.65□□□□□ -0.54
PFDN1-205ENST00000512925 SHDQ96IW2 340 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 B3GALT6Q96L58 329 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 NLRP4Q96MN2 994 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 TCEANC2Q96MN5 208 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 BCO2Q9BYV7 579 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 OSBPL6Q9BZF3 934 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 EPC1Q9H2F5 836 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 PIDD1Q9HB75 910 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 SPATA6Q9NWH7 488 aaPredicted RBP11.65□□□□□ -0.54
PFDN1-205ENST00000512925 ZFP37Q9Y6Q3 630 aaPredicted RBP11.65□□□□□ -0.54
PFDN1-205ENST00000512925 CACNA1GO43497 2377 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 FAM170BA6NMN3 283 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 GAS7O60861 476 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 ZMYND10O75800 440 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 ADRB1P08588 477 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 NCLP19338 710 aaKnown RBP11.64□□□□□ -0.55
PFDN1-205ENST00000512925 LMNB2Q03252 620 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 PRKCQQ04759 706 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 FZD5Q13467 585 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 MLF2Q15773 248 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-205ENST00000512925 ST3GAL2Q16842 350 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 SLC44A4Q53GD3 710 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 LRCH2Q5VUJ6 765 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 ELMSAN1Q6PJG2 1045 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 ATRIPQ8WXE1 791 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 CCDC136Q96JN2 1154 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 MBOAT7Q96N66 472 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 RTKNQ9BST9 563 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 TEKT3Q9BXF9 490 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 GPR62Q9BZJ7 368 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 C6orf50Q9HD87 102 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 PARD6AQ9NPB6 346 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 ZSCAN32Q9NX65 697 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 SMG5Q9UPR3 1016 aaKnown RBP11.64□□□□□ -0.55
PFDN1-205ENST00000512925 WDR81Q562E7 1941 aa11.64□□□□□ -0.55
PFDN1-205ENST00000512925 ARL5CA6NH57 179 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 SHISA7A6NL88 538 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 GOLGA8AA7E2F4 631 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 GOLGA8BA8MQT2 603 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 RPL17P18621 184 aaKnown RBP11.63□□□□□ -0.55
PFDN1-205ENST00000512925 CD72P21854 359 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 FSHRP23945 695 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 NTHL1P78549 312 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 BMP2KLQ5H9B9 411 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 TSSK4Q6SA08 328 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 MIER3Q7Z3K6 550 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 GRASPQ7Z6J2 395 aaPredicted RBP11.63□□□□□ -0.55
PFDN1-205ENST00000512925 GPR65Q8IYL9 337 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 RDM1Q8NG50 284 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 PHKBQ93100 1093 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 MARVELD3Q96A59 401 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 CLDN23Q96B33 292 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 GAD1Q99259 594 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 LTB4R2Q9NPC1 389 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 FNIP2Q9P278 1114 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 CDH7Q9ULB5 785 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 COL4A3BPQ9Y5P4 624 aa11.63□□□□□ -0.55
PFDN1-205ENST00000512925 KLF18A0A0U1RQI7 1052 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 DDX11L8A8MPP1 907 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 ITGA4P13612 1032 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 GNA11P29992 359 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 MLH1P40692 756 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 SCNN1GP51170 649 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 USP11P51784 963 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 UBXN2BQ14CS0 331 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 PLA2G4FQ68DD2 849 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 FUT10Q6P4F1 479 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 RSPO2Q6UXX9 243 aaPredicted RBP11.62□□□□□ -0.55
PFDN1-205ENST00000512925 DHX32Q7L7V1 743 aaKnown RBP11.62□□□□□ -0.55
PFDN1-205ENST00000512925 SRGAP1Q7Z6B7 1085 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 GLYCTKQ8IVS8 523 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 GSTCDQ8NEC7 633 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 PRPF31Q8WWY3 499 aaKnown RBP11.62□□□□□ -0.55
PFDN1-205ENST00000512925 FGF13Q92913 245 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 ZFP42Q96MM3 310 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 ESYT1Q9BSJ8 1104 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 EIF2AQ9BY44 585 aaKnown RBP11.62□□□□□ -0.55
PFDN1-205ENST00000512925 UBN1Q9NPG3 1134 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.62□□□□□ -0.55
PFDN1-205ENST00000512925 CDV3Q9UKY7 258 aaKnown RBP11.62□□□□□ -0.55
PFDN1-205ENST00000512925 HES2Q9Y543 173 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 IPPQ9Y573 584 aa11.62□□□□□ -0.55
PFDN1-205ENST00000512925 PRPF3O43395 683 aaKnown RBP11.61□□□□□ -0.55
PFDN1-205ENST00000512925 TBC1D4O60343 1298 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 SRGAP2CP0DJJ0 459 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 TARSP26639 723 aaKnown RBP11.61□□□□□ -0.55
PFDN1-205ENST00000512925 MAGEA9P43362 315 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 RCAN1P53805 252 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 NPEPPSP55786 919 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 USP41Q3LFD5 358 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 ADCK5Q3MIX3 580 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 Q4G0T1 1027 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 CNNM3Q8NE01 707 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 ITFG1Q8TB96 612 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms