RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 C8AP07357 584 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 SKIP12755 728 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 ITGB5P18084 799 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 GDI1P31150 447 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 NLRP11P59045 1033 aaKnown RBP10.67□□□□□ -0.7
CLCN3-208ENST00000512813 FAM193AP78312 1265 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 PPM1LQ5SGD2 360 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 PDXDC1Q6P996 788 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 GLYCTKQ8IVS8 523 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 FAM9BQ8IZU0 186 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 SYNPOQ8N3V7 929 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 MCRS1Q96EZ8 462 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 PRORYQ9H606 182 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 CHST12Q9NRB3 414 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 HCFC1R1Q9NWW0 138 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 EVLQ9UI08 416 aaPredicted RBP10.67□□□□□ -0.7
CLCN3-208ENST00000512813 POLIQ9UNA4 740 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 MRPS23Q9Y3D9 190 aaKnown RBP10.67□□□□□ -0.7
CLCN3-208ENST00000512813 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
CLCN3-208ENST00000512813 ARNTLO00327 626 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 ZNF862O60290 1169 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 DARSP14868 501 aaKnown RBP10.66□□□□□ -0.7
CLCN3-208ENST00000512813 PSMC3P17980 439 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 RAB27AP51159 221 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 ACTR2P61160 394 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 IRX4P78413 519 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 LMAN2Q12907 356 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 MTMR1Q13613 665 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 CCINQ13939 588 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 KARSQ15046 597 aaKnown RBP10.66□□□□□ -0.7
CLCN3-208ENST00000512813 LONRF3Q496Y0 759 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 ZMYM1Q5SVZ6 1142 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 FAM193BQ96PV7 902 aaPredicted RBP10.66□□□□□ -0.7
CLCN3-208ENST00000512813 KAT14Q9H8E8 782 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 DNMT3BQ9UBC3 853 aaKnown RBP10.66□□□□□ -0.7
CLCN3-208ENST00000512813 PRG3Q9Y2Y8 225 aaPredicted RBP10.66□□□□□ -0.7
CLCN3-208ENST00000512813 ITPR3Q14573 2671 aa10.66□□□□□ -0.7
CLCN3-208ENST00000512813 TSC2P49815 1807 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 MGAQ8IWI9 3026 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 C2CD3Q4AC94 2353 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 IGKV6D-21A0A0A0MT36 114 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 B4E1Z4 1266 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 PYCARD-AS1I3L0S3 204 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 MAFGO15525 162 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 ZNF623O75123 536 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 PCP11498 1178 aaKnown RBP10.65□□□□□ -0.7
CLCN3-208ENST00000512813 RPL17P18621 184 aaKnown RBP10.65□□□□□ -0.7
CLCN3-208ENST00000512813 FGFR4P22455 802 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 HNRNPDQ14103 355 aaKnown RBP10.65□□□□□ -0.7
CLCN3-208ENST00000512813 SLC5A9Q2M3M2 681 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 TWF2Q6IBS0 349 aaKnown RBP10.65□□□□□ -0.7
CLCN3-208ENST00000512813 AGMOQ6ZNB7 445 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 METTL13Q8N6R0 699 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 LINC01465Q8N7H1 131 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 PIP4K2CQ8TBX8 421 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 DEPDC1BQ8WUY9 529 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 B3GALT6Q96L58 329 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 MAP7D2Q96T17 732 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 C8orf33Q9H7E9 229 aaPredicted RBP10.65□□□□□ -0.7
CLCN3-208ENST00000512813 ZFP14Q9HCL3 533 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 AVENQ9NQS1 362 aaPredicted RBP10.65□□□□□ -0.7
CLCN3-208ENST00000512813 ECHDC1Q9NTX5 307 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 FAM105AQ9NUU6 356 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 KANSL3Q9P2N6 904 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 UBIAD1Q9Y5Z9 338 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 DOPEY2Q9Y3R5 2298 aa10.65□□□□□ -0.7
CLCN3-208ENST00000512813 CREBBPQ92793 2442 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 ATG7O95352 703 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 CEBPBP17676 345 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 CLCN3P51790 818 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 ALX1Q15699 326 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 FAM78AQ5JUQ0 283 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 VPS53Q5VIR6 699 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 ZKSCAN2Q63HK3 967 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 PMS2CLQ68D20 193 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 VITQ6UXI7 678 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 CYP2U1Q7Z449 544 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 ITPRIPQ8IWB1 547 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 STAG2Q8N3U4 1231 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 CAMKK1Q8N5S9 505 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 SPATA18Q8TC71 538 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 ZKSCAN3Q9BRR0 538 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 APOL6Q9BWW8 343 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 LRRCC1Q9C099 1032 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 AKT3Q9Y243 479 aa10.64□□□□□ -0.71
CLCN3-208ENST00000512813 COL5A1P20908 1838 aaPredicted RBP10.63□□□□□ -0.71
CLCN3-208ENST00000512813 NFASCO94856 1347 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 CNTNAP2Q9UHC6 1331 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 MYBPHLA2RUH7 354 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 KLRF2D3W0D1 207 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 NRG2O14511 850 aaPredicted RBP10.63□□□□□ -0.71
CLCN3-208ENST00000512813 DCLK1O15075 740 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 FTH1P19P0C7X4 201 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 MAPK8P45983 427 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 GPC3P51654 580 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 AFF1P51825 1210 aaKnown RBP10.63□□□□□ -0.71
CLCN3-208ENST00000512813 USP41Q3LFD5 358 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 CCDC178Q5BJE1 867 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 PKN3Q6P5Z2 889 aa10.63□□□□□ -0.71
CLCN3-208ENST00000512813 TXNDC11Q6PKC3 985 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms