RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 LAG3P18627 525 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 BMP5P22003 454 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 ADSLP30566 484 aaPredicted RBP3.31□□□□□ -1.88
PDGFC-208ENST00000512711 CCT2P78371 535 aaKnown RBP3.31□□□□□ -1.88
PDGFC-208ENST00000512711 CDK17Q00537 523 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 OCRLQ01968 901 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 STRN3Q13033 797 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 TIGD2Q4W5G0 525 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 C19orf54Q5BKX5 351 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 METTL24Q5JXM2 366 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 DOK3Q7L591 496 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 RNF180Q86T96 592 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 C11orf74Q86VG3 221 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 DNAJC10Q8IXB1 793 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 RNF169Q8NCN4 708 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 FBXO18Q8NFZ0 1043 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 TGFBRAP1Q8WUH2 860 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 SNX33Q8WV41 574 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 NEU1Q99519 415 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 WDR11Q9BZH6 1224 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 SERHL2Q9H4I8 314 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 AKIP1Q9NQ31 210 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 DPP7Q9UHL4 492 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 CHST2Q9Y4C5 530 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 CDY2AQ9Y6F7 541 aa3.31□□□□□ -1.88
PDGFC-208ENST00000512711 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.3□□□□□ -1.88
PDGFC-208ENST00000512711 NRP2O60462 931 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 RECQL4O94761 1208 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 HSP90B1P14625 803 aaKnown RBP3.3□□□□□ -1.88
PDGFC-208ENST00000512711 ZSCAN20P17040 1043 aaPredicted RBP3.3□□□□□ -1.88
PDGFC-208ENST00000512711 ADRA1BP35368 520 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 ZEB1P37275 1124 aaPredicted RBP3.3□□□□□ -1.88
PDGFC-208ENST00000512711 NRG3P56975 720 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 PURAQ00577 322 aaKnown RBP3.3□□□□□ -1.88
PDGFC-208ENST00000512711 PTPAQ15257 358 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 UGT8Q16880 541 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 BMT2Q1RMZ1 405 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 PDCD4Q53EL6 469 aaKnown RBP3.3□□□□□ -1.88
PDGFC-208ENST00000512711 PLEKHG4Q58EX7 1191 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 CCDC178Q5BJE1 867 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 LY6G5CQ5SRR4 150 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 PRAMEF14Q5SWL7 426 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 FAM102AQ5T9C2 384 aaPredicted RBP3.3□□□□□ -1.88
PDGFC-208ENST00000512711 LRRC55Q6ZSA7 311 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 LHFPL2Q6ZUX7 228 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 Q6ZVL8 140 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 DDX46Q7L014 1031 aaKnown RBP3.3□□□□□ -1.88
PDGFC-208ENST00000512711 GDF7Q7Z4P5 450 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 THNSL2Q86YJ6 484 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 GLB1L2Q8IW92 636 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 BEND2Q8NDZ0 799 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 STON2Q8WXE9 905 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 MYEOVQ96EZ4 313 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 FAM193BQ96PV7 902 aaPredicted RBP3.3□□□□□ -1.88
PDGFC-208ENST00000512711 GPRC5DQ9NZD1 345 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 PACSIN3Q9UKS6 424 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 MAPRE3Q9UPY8 281 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 MAP3K2Q9Y2U5 619 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 TBX22Q9Y458 520 aa3.3□□□□□ -1.88
PDGFC-208ENST00000512711 PCSK5Q92824 1860 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 CCDC78A2IDD5 438 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 UNC119BA6NIH7 251 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 TMEM200CA6NKL6 621 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 DRGXA6NNA5 263 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 PRR5-ARHGAP8B1AHC4 643 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 TRIM24O15164 1050 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 GYPEP15421 78 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 WNT3AP56704 352 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 SCAND1P57086 179 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 HNRNPA0Q13151 305 aaKnown RBP3.29□□□□□ -1.88
PDGFC-208ENST00000512711 DHCR24Q15392 516 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 FSCN1Q16658 493 aaKnown RBP3.29□□□□□ -1.88
PDGFC-208ENST00000512711 EFCAB12Q6NXP0 572 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 DRICH1Q6PGQ1 229 aaPredicted RBP3.29□□□□□ -1.88
PDGFC-208ENST00000512711 KCNV1Q6PIU1 500 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 HDGFL2Q7Z4V5 671 aaPredicted RBP3.29□□□□□ -1.88
PDGFC-208ENST00000512711 SYNE4Q8N205 404 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 OR10H5Q8NGA6 315 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 NTN5Q8WTR8 489 aaPredicted RBP3.29□□□□□ -1.88
PDGFC-208ENST00000512711 TSPEARQ8WU66 669 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 LMBR1Q8WVP7 490 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 RSAD2Q8WXG1 361 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 RIN2Q8WYP3 895 aaPredicted RBP3.29□□□□□ -1.88
PDGFC-208ENST00000512711 USP7Q93009 1102 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 PHACTR3Q96KR7 559 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 CDC5LQ99459 802 aaKnown RBP3.29□□□□□ -1.88
PDGFC-208ENST00000512711 ADAM2Q99965 735 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 SLC46A2Q9BY10 475 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 WNT8AQ9H1J5 351 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 WDR26Q9H7D7 661 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 SYNPO2LQ9H987 977 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 POGKQ9P215 609 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 TNFRSF18Q9Y5U5 241 aa3.29□□□□□ -1.88
PDGFC-208ENST00000512711 EPN1Q9Y6I3 576 aaPredicted RBP3.29□□□□□ -1.88
PDGFC-208ENST00000512711 ATRNL1Q5VV63 1379 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 RPTORQ8N122 1335 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 SALL3Q9BXA9 1300 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 GOLGA8AA7E2F4 631 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 ENPP3O14638 875 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 PRSS23O95084 383 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms