RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ARL8AQ96BM9 186 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 WDR24Q96S15 920 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 PPP1R16BQ96T49 567 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 HERC2P3Q9BVR0 1158 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 SEMA4AQ9H3S1 761 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 PLSCR4Q9NRQ2 329 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 HOMER3Q9NSC5 361 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZBTB40Q9NUA8 1239 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 NSMCE4AQ9NXX6 385 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 STK39Q9UEW8 545 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 TBC1D29Q9UFV1 150 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 PTBP2Q9UKA9 531 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 C19orf53Q9UNZ5 99 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 XDHP47989 1333 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 A0A1W2PPH5 198 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 DOK2O60496 412 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 DDNO94850 711 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 GUCY2CP25092 1073 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 GYG1P46976 350 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 RFX5P48382 616 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 GSK3AP49840 483 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 ARFIP1P53367 373 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 EIF6P56537 245 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 GPR85P60893 370 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 CD83Q01151 205 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 TNFAIP2Q03169 654 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 TFCP2Q12800 502 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 PCBP2Q15366 365 aaKnown RBP eCLIP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZNF423Q2M1K9 1284 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 HHATQ5VTY9 493 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 HAUS3Q68CZ6 603 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 LHX8Q68G74 356 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 PLEKHM3Q6ZWE6 761 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 CENPQQ7L2Z9 268 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 RAB11FIP4Q86YS3 637 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 FAM9CQ8IZT9 166 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 AVL9Q8NBF6 648 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 SPC24Q8NBT2 197 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 OR6C4Q8NGE1 309 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 FBXO27Q8NI29 283 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 UNKQ9C0B0 810 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 IL1RAPL2Q9NP60 686 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 FAM8A1Q9UBU6 413 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 DOLKQ9UPQ8 538 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 MRPL11Q9Y3B7 192 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 SPEF1Q9Y4P9 236 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 TACC3Q9Y6A5 838 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZFP37Q9Y6Q3 630 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZNF804BA4D1E1 1349 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 MYH3P11055 1940 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 RAD50Q92878 1312 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 SGK1O00141 431 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 NEMP1O14524 444 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 FSCN2O14926 492 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 POU2F2P09086 479 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 C6orf222P0C671 652 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 GAP43P17677 238 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 PPM1AP35813 382 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 GNL1P36915 607 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 TKTL1P51854 596 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 TIMM10P62072 90 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 NEDD9Q14511 834 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZNF267Q14586 743 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 RCN1Q15293 331 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 MAP3K11Q16584 847 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 FOXB2Q5VYV0 432 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 CAPRIN2Q6IMN6 1127 aaKnown RBP5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 ARHGAP11AQ6P4F7 1023 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 ATG9AQ7Z3C6 839 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 DGLUCYQ7Z3D6 616 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 SIRT2Q8IXJ6 389 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 TRIML2Q8N7C3 387 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 BBOF1Q8ND07 529 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 FAM156AQ8NDB6 213 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 DEPTORQ8TB45 409 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 DIS3LQ8TF46 1054 aaKnown RBP5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 FUBP3Q96I24 572 aaKnown RBP eCLIP5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 MFSD14AQ96MC6 490 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 YME1L1Q96TA2 773 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZPBPQ9BS86 351 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 MXD3Q9BW11 206 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 NCOR1P1Q9H4R4 102 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 SEPT11Q9NVA2 429 aaKnown RBP5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 HAUS2Q9NVX0 235 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 RTEL1Q9NZ71 1219 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 AP1M2Q9Y6Q5 423 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 COL4A5P29400 1685 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 RTL9Q8NET4 1388 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZNF541Q9H0D2 1346 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 TXNL1O43396 289 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 ECE2O60344 883 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 RFPL3O75679 317 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 USP1O94782 785 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 LTFP02788 710 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 HDCP19113 662 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 NEK4P51957 841 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 ATP8B2P98198 1209 aa5.45□□□□□ -1.54
TRAPPC11-208ENST00000511955 BEX3Q00994 111 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms