RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, human

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUB1-208	ENST00000511175	CDYL2	Q8N8U2	506 aa		4.28	□□□□□ -1.72
SUB1-208	ENST00000511175	CAGE1	Q8TC20	777 aa		4.28	□□□□□ -1.72
SUB1-208	ENST00000511175	ZNF384	Q8TF68	577 aa		4.28	□□□□□ -1.72
SUB1-208	ENST00000511175	POGK	Q9P215	609 aa		4.28	□□□□□ -1.72
SUB1-208	ENST00000511175		A0A1W2PR48	441 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	DNAJC9-AS1	A6NH13	148 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	LRRC3C	A6NJW4	275 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	C1QL1	O75973	258 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	HMGB1	P09429	215 aa	Known RBP	4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	CLEC2L	P0C7M8	214 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	ATP2A2	P16615	1042 aa	Known RBP	4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	ATP2B1	P20020	1258 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	NAALADL2	Q58DX5	795 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	ARHGEF25	Q86VW2	580 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	SRRM1	Q8IYB3	904 aa	Known RBP	4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	LILRB2	Q8N423	598 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	FERMT2	Q96AC1	680 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	ZNF496	Q96IT1	587 aa	Predicted RBP	4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	DUSP26	Q9BV47	211 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	KIAA1586	Q9HCI6	787 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	RNF181	Q9P0P0	153 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	CLCA2	Q9UQC9	943 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	FPGT-TNNI3K	V9GXZ4	949 aa		4.27	□□□□□ -1.73
SUB1-208	ENST00000511175	MAST3	O60307	1309 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	LCHN	A4D1U4	455 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	TBKBP1	A7MCY6	615 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	HLA-DOA	P06340	250 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	PFKM	P08237	780 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	JMJD7	P0C870	316 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	SDS	P20132	328 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	ABCG1	P45844	678 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	SIM1	P81133	766 aa	Predicted RBP	4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	MGAT5	Q09328	741 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	C2orf27A	Q580R0	203 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	EFCAB12	Q6NXP0	572 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	MICALCL	Q6ZW33	695 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	GPR149	Q86SP6	731 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	SCARB1	Q8WTV0	552 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	GAB3	Q8WWW8	586 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175		Q96MF0	132 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	SRPK1	Q96SB4	655 aa	Known RBP	4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	TANGO6	Q9C0B7	1094 aa		4.26	□□□□□ -1.73
SUB1-208	ENST00000511175	SPATA31D3	P0C874	917 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	RBP3	P10745	1247 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	BLOC1S1	P78537	153 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	NHLH1	Q02575	133 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	ZNF169	Q14929	603 aa	Predicted RBP	4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	SPATA31D4	Q6ZUB0	917 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	ZZZ3	Q8IYH5	903 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	FAM177A1	Q8N128	213 aa	Predicted RBP	4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	MDM1	Q8TC05	714 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	ANKS1A	Q92625	1134 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	TFAP2C	Q92754	450 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	CEP95	Q96GE4	821 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	CDC5L	Q99459	802 aa	Known RBP	4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	MTFR1L	Q9H019	292 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	SEMA4G	Q9NTN9	838 aa		4.25	□□□□□ -1.73
SUB1-208	ENST00000511175	PRSS38	A1L453	326 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	PROB1	E7EW31	1015 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	CDKL5	O76039	1030 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	CFI	P05156	583 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	ELANE	P08246	267 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	RARRES1	P49788	294 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	CHN2	P52757	468 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	BMT2	Q1RMZ1	405 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	FNDC3B	Q53EP0	1204 aa	Known RBP	4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	LMBR1L	Q6UX01	489 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	ABHD15	Q6UXT9	468 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	ESPNL	Q6ZVH7	1005 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	SREK1	Q8WXA9	508 aa	Known RBP	4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	PHACTR3	Q96KR7	559 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	DRC1	Q96MC2	740 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	SLC29A3	Q9BZD2	475 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	MS4A5	Q9H3V2	200 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	MSRA	Q9UJ68	235 aa		4.24	□□□□□ -1.73
SUB1-208	ENST00000511175	ST20-MTHFS	A0A0A6YYL1	179 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175		B5MCH6	92 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	TGM5	O43548	720 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	FDXR	P22570	491 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	XPA	P23025	273 aa	Predicted RBP	4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	CD40	P25942	277 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	MGAT1	P26572	445 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	LRRC32	Q14392	662 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	DDB1	Q16531	1140 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	CFAP100	Q494V2	611 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	MFSD14B	Q5SR56	506 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	UBE2R2	Q712K3	238 aa	Predicted RBP	4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	NXPE1	Q8N323	547 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	SH2D3C	Q8N5H7	860 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	SLC35B2	Q8TB61	432 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	SMG7	Q92540	1137 aa	Known RBP	4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	SLC9A6	Q92581	669 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	PRDM12	Q9H4Q4	367 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	FOXJ2	Q9P0K8	574 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	EVL	Q9UI08	416 aa	Predicted RBP	4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	TMPRSS11E	Q9UL52	423 aa		4.23	□□□□□ -1.73
SUB1-208	ENST00000511175	CGB1	A6NKQ9	187 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms