RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 CDC5LQ99459 802 aaKnown RBP7.22□□□□□ -1.25
NUP54-209ENST00000510569 PCSK5Q92824 1860 aa7.21□□□□□ -1.25
NUP54-209ENST00000510569 TMEM200CA6NKL6 621 aa7.21□□□□□ -1.26
NUP54-209ENST00000510569 LEFTY2O00292 366 aa7.21□□□□□ -1.26
NUP54-209ENST00000510569 ITGA10O75578 1167 aa7.21□□□□□ -1.26
NUP54-209ENST00000510569 GASTP01350 101 aa7.21□□□□□ -1.26
NUP54-209ENST00000510569 ZSCAN20P17040 1043 aaPredicted RBP7.21□□□□□ -1.26
NUP54-209ENST00000510569 CTSSP25774 331 aa7.21□□□□□ -1.26
NUP54-209ENST00000510569 FSCN1Q16658 493 aaKnown RBP7.21□□□□□ -1.26
NUP54-209ENST00000510569 RNF180Q86T96 592 aa7.21□□□□□ -1.26
NUP54-209ENST00000510569 SYT12Q8IV01 421 aa7.21□□□□□ -1.26
NUP54-209ENST00000510569 USP7Q93009 1102 aa7.21□□□□□ -1.26
NUP54-209ENST00000510569 PACSIN3Q9UKS6 424 aa7.21□□□□□ -1.26
NUP54-209ENST00000510569 TBX22Q9Y458 520 aa7.21□□□□□ -1.26
NUP54-209ENST00000510569 COL4A3Q01955 1670 aa7.21□□□□□ -1.26
NUP54-209ENST00000510569 ZMYM3Q14202 1370 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 CENPVL1A0A0U1RR11 272 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 DIRC3C9JPN6 131 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 RNASET2O00584 256 aaKnown RBP7.2□□□□□ -1.26
NUP54-209ENST00000510569 B3GALT2O43825 422 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 LPLP06858 475 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 LGALS4P56470 323 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 CT83Q5H943 113 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 NPM2Q86SE8 214 aaKnown RBP7.2□□□□□ -1.26
NUP54-209ENST00000510569 OR10H5Q8NGA6 315 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 ZNF480Q8WV37 535 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 IFT22Q9H7X7 185 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 TOPORSQ9NS56 1045 aaPredicted RBP7.2□□□□□ -1.26
NUP54-209ENST00000510569 GPRC5DQ9NZD1 345 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 TRPM5Q9NZQ8 1165 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 DKK2Q9UBU2 259 aa7.2□□□□□ -1.26
NUP54-209ENST00000510569 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.19□□□□□ -1.26
NUP54-209ENST00000510569 NEMP1O14524 444 aa7.19□□□□□ -1.26
NUP54-209ENST00000510569 ZEB2O60315 1214 aa7.19□□□□□ -1.26
NUP54-209ENST00000510569 LMNAP02545 664 aaKnown RBP7.19□□□□□ -1.26
NUP54-209ENST00000510569 CRHR1P34998 444 aa7.19□□□□□ -1.26
NUP54-209ENST00000510569 SESN3P58005 492 aa7.19□□□□□ -1.26
NUP54-209ENST00000510569 ANKS6Q68DC2 871 aa7.19□□□□□ -1.26
NUP54-209ENST00000510569 THNSL2Q86YJ6 484 aa7.19□□□□□ -1.26
NUP54-209ENST00000510569 PLXDC1Q8IUK5 500 aa7.19□□□□□ -1.26
NUP54-209ENST00000510569 CLRN3Q8NCR9 226 aa7.19□□□□□ -1.26
NUP54-209ENST00000510569 ACAP3Q96P50 834 aa7.19□□□□□ -1.26
NUP54-209ENST00000510569 CRAMP1Q96RY5 1269 aa7.19□□□□□ -1.26
NUP54-209ENST00000510569 AKIP1Q9NQ31 210 aa7.19□□□□□ -1.26
NUP54-209ENST00000510569 APOBEC2Q9Y235 224 aaKnown RBP7.19□□□□□ -1.26
NUP54-209ENST00000510569 TBKBP1A7MCY6 615 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 PPFIA2O75334 1257 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 ULK1O75385 1050 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 NCR1O76036 304 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 ENPP1P22413 925 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 MGAT1P26572 445 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 NHLH2Q02577 135 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 TAP1Q03518 808 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 MST1LQ2TV78 715 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 BEAN1Q3B7T3 259 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 Q6YL49 198 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 NOP9Q86U38 636 aaKnown RBP7.18□□□□□ -1.26
NUP54-209ENST00000510569 ARHGEF19Q8IW93 802 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 EAF2Q96CJ1 260 aaPredicted RBP7.18□□□□□ -1.26
NUP54-209ENST00000510569 TTC1Q99614 292 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 TOR3AQ9H497 397 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 SPON1Q9HCB6 807 aa7.18□□□□□ -1.26
NUP54-209ENST00000510569 LPXNO60711 386 aa7.17□□□□□ -1.26
NUP54-209ENST00000510569 BMP5P22003 454 aa7.17□□□□□ -1.26
NUP54-209ENST00000510569 BMPR1AP36894 532 aa7.17□□□□□ -1.26
NUP54-209ENST00000510569 UGT8Q16880 541 aa7.17□□□□□ -1.26
NUP54-209ENST00000510569 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.17□□□□□ -1.26
NUP54-209ENST00000510569 BMT2Q1RMZ1 405 aa7.17□□□□□ -1.26
NUP54-209ENST00000510569 TAF7LQ5H9L4 462 aa7.17□□□□□ -1.26
NUP54-209ENST00000510569 HECTD2Q5U5R9 776 aa7.17□□□□□ -1.26
NUP54-209ENST00000510569 PDZD4Q76G19 769 aaPredicted RBP7.17□□□□□ -1.26
NUP54-209ENST00000510569 GPR150Q8NGU9 434 aa7.17□□□□□ -1.26
NUP54-209ENST00000510569 MDM1Q8TC05 714 aa7.17□□□□□ -1.26
NUP54-209ENST00000510569 CEP95Q96GE4 821 aa7.17□□□□□ -1.26
NUP54-209ENST00000510569 RAX2Q96IS3 184 aa7.17□□□□□ -1.26
NUP54-209ENST00000510569 POLR2AP24928 1970 aaKnown RBP7.17□□□□□ -1.26
NUP54-209ENST00000510569 MARCH11A6NNE9 402 aa7.16□□□□□ -1.26
NUP54-209ENST00000510569 PHF2O75151 1096 aa7.16□□□□□ -1.26
NUP54-209ENST00000510569 RBP3P10745 1247 aa7.16□□□□□ -1.26
NUP54-209ENST00000510569 ZEB1P37275 1124 aaPredicted RBP7.16□□□□□ -1.26
NUP54-209ENST00000510569 ID4P47928 161 aa7.16□□□□□ -1.26
NUP54-209ENST00000510569 FLT3LGP49771 235 aa7.16□□□□□ -1.26
NUP54-209ENST00000510569 GYS2P54840 703 aa7.16□□□□□ -1.26
NUP54-209ENST00000510569 RNASE9P60153 205 aaKnown RBP7.16□□□□□ -1.26
NUP54-209ENST00000510569 MFSD14BQ5SR56 506 aa7.16□□□□□ -1.26
NUP54-209ENST00000510569 PRAMEF14Q5SWL7 426 aa7.16□□□□□ -1.26
NUP54-209ENST00000510569 HDGFL2Q7Z4V5 671 aaPredicted RBP7.16□□□□□ -1.26
NUP54-209ENST00000510569 BEND2Q8NDZ0 799 aa7.16□□□□□ -1.26
NUP54-209ENST00000510569 SERHL2Q9H4I8 314 aa7.16□□□□□ -1.26
NUP54-209ENST00000510569 RPTORQ8N122 1335 aa7.16□□□□□ -1.26
NUP54-209ENST00000510569 PJA2O43164 708 aa7.15□□□□□ -1.26
NUP54-209ENST00000510569 FAM102AQ5T9C2 384 aaPredicted RBP7.15□□□□□ -1.26
NUP54-209ENST00000510569 METRNLQ641Q3 311 aa7.15□□□□□ -1.26
NUP54-209ENST00000510569 EFCAB12Q6NXP0 572 aa7.15□□□□□ -1.26
NUP54-209ENST00000510569 DDX46Q7L014 1031 aaKnown RBP7.15□□□□□ -1.26
NUP54-209ENST00000510569 PRIMA1Q86XR5 153 aa7.15□□□□□ -1.26
NUP54-209ENST00000510569 TFAP2CQ92754 450 aa7.15□□□□□ -1.26
NUP54-209ENST00000510569 DPP7Q9UHL4 492 aa7.15□□□□□ -1.26
NUP54-209ENST00000510569 ADCY6O43306 1168 aa7.14□□□□□ -1.27
NUP54-209ENST00000510569 FBLP22087 321 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms