RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 TIGD5Q53EQ6 642 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 TCEAL5Q5H9L2 206 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 RESP18Q5W5W9 173 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 ALKAL1Q6UXT8 129 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 ZPBP2Q6X784 338 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 COLGALT2Q8IYK4 626 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 THNSL1Q8IYQ7 743 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 MICALL1Q8N3F8 863 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 MYCT1Q8N699 235 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 PDILTQ8N807 584 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 URGCPQ8TCY9 931 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 BCL7CQ8WUZ0 217 aaPredicted RBP12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 LEO1Q8WVC0 666 aaPredicted RBP12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 MRPS27Q92552 414 aaKnown RBP12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 TMEM175Q9BSA9 504 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 CXCL16Q9H2A7 254 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 NSUN3Q9H649 340 aaKnown RBP12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 SNTG2Q9NY99 539 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 DNAJB4Q9UDY4 337 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 FNDC1Q4ZHG4 1894 aaPredicted RBP12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 REV3LO60673 3130 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 NT5C1B-RDH14C9J2C7 533 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 H0YCG3 227 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 TOM1L1O75674 476 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 FAM13AO94988 1023 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 POMCP01189 267 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 PIGRP01833 764 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 ALDH2P05091 517 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 STAT6P42226 847 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 ME1P48163 572 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 SCNN1GP51170 649 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 HYAL1Q12794 435 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 NAB2Q15742 525 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 XKR4Q5GH76 650 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 PDE12Q6L8Q7 609 aaKnown RBP12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 CNNM4Q6P4Q7 775 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 ZNF720Q7Z2F6 126 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 HACE1Q8IYU2 909 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 ATXN2LQ8WWM7 1075 aaKnown RBP12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 IGSF21Q96ID5 467 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 ZBTB45Q96K62 511 aaPredicted RBP12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 ADPGKQ9BRR6 497 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 APOL6Q9BWW8 343 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 HAPLN2Q9GZV7 340 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 CDT1Q9H211 546 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 CUEDC2Q9H467 287 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 KLK14Q9P0G3 267 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 TBX20Q9UMR3 447 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 COG5Q9UP83 839 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 PCDHGC5Q9Y5F6 944 aa12.9□□□□□ -0.34
HMGXB3-203ENST00000510472 UNC80Q8N2C7 3258 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 SPTBN5Q9NRC6 3674 aaKnown RBP12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 FAM237AA0A1B0GTK4 181 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 PTGESO14684 152 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 NRP1O14786 923 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 MEFVO15553 781 aaPredicted RBP12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 ZC3H11AO75152 810 aaKnown RBP eCLIP12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 PPP1R37O75864 691 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 RECQL4O94761 1208 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 KRT18P05783 430 aaKnown RBP12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 MCF2P10911 925 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 NMT1P30419 496 aaKnown RBP12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 GRM5P41594 1212 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 KRT85P78386 507 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 KRT17Q04695 432 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 RNASELQ05823 741 aaKnown RBP12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 MCL1Q07820 350 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 ADALQ6DHV7 355 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 DYMQ7RTS9 669 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 DDX53Q86TM3 631 aaKnown RBP12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 CEP120Q8N960 986 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 IQUBQ8NA54 791 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 HLA-CQ95604 372 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 VN1R3Q9BXE9 311 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 TLR9Q9NR96 1032 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 SEL1LQ9UBV2 794 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 PARP2Q9UGN5 583 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 HPSEQ9Y251 543 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 ATP6V1DQ9Y5K8 247 aa12.89□□□□□ -0.35
HMGXB3-203ENST00000510472 NCK2O43639 380 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 TBCAO75347 108 aaKnown RBP12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 CMA1P23946 247 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 LTBRP36941 435 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 NUCB2P80303 420 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 GRIK3Q13003 919 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 STRN3Q13033 797 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 ADAM15Q13444 863 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 SLC39A4Q6P5W5 647 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 MPZL3Q6UWV2 235 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 APBB1IPQ7Z5R6 666 aaPredicted RBP12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 ADGRD2Q7Z7M1 963 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 SFR1Q86XK3 245 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 MAP4K3Q8IVH8 894 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 FAM178BQ8IXR5 827 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 RNF168Q8IYW5 571 aaPredicted RBP12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 MRPL43Q8N983 215 aaKnown RBP12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 DHX58Q96C10 678 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms