RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 ITKQ08881 620 aa9.08□□□□□ -0.96
TRAPPC11-206ENST00000509857 ACAP1Q15027 740 aa9.08□□□□□ -0.96
TRAPPC11-206ENST00000509857 FUKQ8N0W3 1084 aa9.08□□□□□ -0.96
TRAPPC11-206ENST00000509857 RPL10LQ96L21 214 aaKnown RBP9.08□□□□□ -0.96
TRAPPC11-206ENST00000509857 IFT122Q9HBG6 1241 aa9.08□□□□□ -0.96
TRAPPC11-206ENST00000509857 ZCCHC11Q5TAX3 1644 aaKnown RBP9.08□□□□□ -0.96
TRAPPC11-206ENST00000509857 RBP3P10745 1247 aa9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 SLC5A3P53794 718 aa9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 C19orf54Q5BKX5 351 aa9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 MSL3Q8N5Y2 521 aaKnown RBP9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 C1orf162Q8NEQ5 155 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 Q8TCH9 128 aa9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 MTMR8Q96EF0 704 aa9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 ASPSCR1Q9BZE9 553 aa9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 CCDC8Q9H0W5 538 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 IL23AQ9NPF7 189 aa9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 ING3Q9NXR8 418 aa9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 SCOCQ9UIL1 159 aa9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 GPR45Q9Y5Y3 372 aa9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 TEX14Q8IWB6 1497 aa9.07□□□□□ -0.96
TRAPPC11-206ENST00000509857 RTEL1-TNFRSF6BF6WH68 1400 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 ARHGEF12Q9NZN5 1544 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 FZD9O00144 591 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 NRP1O14786 923 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 CFBP00751 764 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 AGXTP21549 392 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 ANAPC15P60006 121 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 CDK17Q00537 523 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 ADRM1Q16186 407 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 MBNL2Q5VZF2 373 aaKnown RBP9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 KRT40Q6A162 431 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 BTNL9Q6UXG8 535 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 POLNQ7Z5Q5 900 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 AMOTL1Q8IY63 956 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 LOXL4Q96JB6 756 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 WWC2-AS2Q96NR7 200 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 OR14A2Q96R54 314 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 KRTAP3-1Q9BYR8 98 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 ENKD1Q9H0I2 346 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 PLA2G3Q9NZ20 509 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 JAG2Q9Y219 1238 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 KIF15Q9NS87 1388 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 WDR7Q9Y4E6 1490 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 ERCC6L2Q5T890 1561 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 TTC37Q6PGP7 1564 aa9.06□□□□□ -0.96
TRAPPC11-206ENST00000509857 ARHGAP5Q13017 1502 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 KRTAP4-8A0A0G2JLE6 195 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 A0A1W2PRX2 142 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 ZNF623O75123 536 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 IGBP1P78318 339 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 UBE3CQ15386 1083 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 ABCB5Q2M3G0 1257 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 BRDTQ58F21 947 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 CMTM4Q8IZR5 234 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 GLB1L3Q8NCI6 653 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 SNX33Q8WV41 574 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 FATE1Q969F0 183 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 ACE2Q9BYF1 805 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 SMPD4Q9NXE4 827 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 DUOX2Q9NRD8 1548 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 ERBINQ96RT1 1412 aa9.05□□□□□ -0.96
TRAPPC11-206ENST00000509857 UNC13BO14795 1591 aa9.04□□□□□ -0.96
TRAPPC11-206ENST00000509857 CTSSP25774 331 aa9.04□□□□□ -0.96
TRAPPC11-206ENST00000509857 MAGEA10P43363 369 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC11-206ENST00000509857 GRM7Q14831 915 aa9.04□□□□□ -0.96
TRAPPC11-206ENST00000509857 EFCAB2Q5VUJ9 269 aa9.04□□□□□ -0.96
TRAPPC11-206ENST00000509857 MAGI2Q86UL8 1455 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 SHTN1A0MZ66 631 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 UBE2QL1A1L167 161 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 CCER2I3L3R5 266 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 MT-CO1P00395 513 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 OSMP13725 252 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 EXOSC10Q01780 885 aaKnown RBP9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 SPATS1Q496A3 300 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 GJC2Q5T442 439 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 ABHD15Q6UXT9 468 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 FAXDC2Q96IV6 333 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 C1QTNF3Q9BXJ4 246 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 SLC13A1Q9BZW2 595 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 SPEF1Q9Y4P9 236 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 ABCC1P33527 1531 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 SYCP2Q9BX26 1530 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 UHRF1BP1Q6BDS2 1440 aa9.03□□□□□ -0.96
TRAPPC11-206ENST00000509857 ATP10AO60312 1499 aa9.02□□□□□ -0.96
TRAPPC11-206ENST00000509857 PRAMEF4O60810 478 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 MYBL2P10244 700 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 COMTP21964 271 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 SELENOPP49908 381 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 FOXL1Q12952 345 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 MALLQ13021 153 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 MUM1L1Q5H9M0 696 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 PGM2L1Q6PCE3 622 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 Q6ZSN1 163 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 FUBP3Q96I24 572 aaKnown RBP eCLIP9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 C8orf49Q96NF6 230 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 TCF25Q9BQ70 676 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 GREM2Q9H772 168 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 TLR9Q9NR96 1032 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 MKS1Q9NXB0 559 aa9.02□□□□□ -0.97
TRAPPC11-206ENST00000509857 ST6GALNAC2Q9UJ37 374 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms