RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 CCDC86Q9H6F5 360 aaKnown RBP4.4□□□□□ -1.71
RNF4-211ENST00000509206 KAT14Q9H8E8 782 aa4.4□□□□□ -1.71
RNF4-211ENST00000509206 HEBP1Q9NRV9 189 aa4.4□□□□□ -1.71
RNF4-211ENST00000509206 DNAAF2Q9NVR5 837 aaKnown RBP4.4□□□□□ -1.71
RNF4-211ENST00000509206 DACT1Q9NYF0 836 aa4.4□□□□□ -1.71
RNF4-211ENST00000509206 PKD2L1Q9P0L9 805 aa4.4□□□□□ -1.71
RNF4-211ENST00000509206 CDH7Q9ULB5 785 aa4.4□□□□□ -1.71
RNF4-211ENST00000509206 INPP5FQ9Y2H2 1132 aa4.4□□□□□ -1.71
RNF4-211ENST00000509206 FAN1Q9Y2M0 1017 aa4.4□□□□□ -1.71
RNF4-211ENST00000509206 PCDHGA5Q9Y5G8 931 aa4.4□□□□□ -1.71
RNF4-211ENST00000509206 LCTP09848 1927 aa4.4□□□□□ -1.71
RNF4-211ENST00000509206 SDK1Q7Z5N4 2213 aa4.4□□□□□ -1.71
RNF4-211ENST00000509206 GREB1LQ9C091 1923 aaPredicted RBP4.39□□□□□ -1.71
RNF4-211ENST00000509206 HELZ2Q9BYK8 2649 aaKnown RBP4.39□□□□□ -1.71
RNF4-211ENST00000509206 GSTTP1A0A1W2PQM5 241 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 H0Y626 953 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 J3QKU1 62 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 M0R2C6 588 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 CAPN9O14815 690 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 ORC4O43929 436 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 RAB11FIP3O75154 756 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 XYLBO75191 536 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 RPP40O75818 363 aaKnown RBP4.39□□□□□ -1.71
RNF4-211ENST00000509206 EPN2O95208 641 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 TRIM16O95361 564 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 GALTP07902 379 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 CSRP1P21291 193 aaKnown RBP4.39□□□□□ -1.71
RNF4-211ENST00000509206 MPLP40238 635 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 STAT5BP51692 787 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 CREB5Q02930 508 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 WTAPQ15007 396 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 KIZQ2M2Z5 673 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 LONRF3Q496Y0 759 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 CCDC178Q5BJE1 867 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 CLLU1OSQ5K130 101 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 LIN9Q5TKA1 542 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 CEP85Q6P2H3 762 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 GLB1LQ6UWU2 654 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 MFSD6Q6ZSS7 791 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 GRASPQ7Z6J2 395 aaPredicted RBP4.39□□□□□ -1.71
RNF4-211ENST00000509206 ZNF598Q86UK7 904 aaKnown RBP4.39□□□□□ -1.71
RNF4-211ENST00000509206 SPEM1Q8N4L4 309 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 METTL13Q8N6R0 699 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 KBTBD3Q8NAB2 608 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 DEFB124Q8NES8 71 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 SMARCC2Q8TAQ2 1214 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 URGCPQ8TCY9 931 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 HDAC7Q8WUI4 952 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 TRAPPC12Q8WVT3 735 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 PIK3R5Q8WYR1 880 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 RSPH1Q8WYR4 309 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 BBC3Q96PG8 261 aaPredicted RBP4.39□□□□□ -1.71
RNF4-211ENST00000509206 UBL7Q96S82 380 aaPredicted RBP4.39□□□□□ -1.71
RNF4-211ENST00000509206 C1QTNF2Q9BXJ5 285 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 BRD9Q9H8M2 597 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 TMEM9BQ9NQ34 198 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 ZDHHC7Q9NXF8 308 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 KLK13Q9UKR3 277 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNF4-211ENST00000509206 RAI2Q9Y5P3 530 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 ZZEF1O43149 2961 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 KIAA1671Q9BY89 1806 aa4.39□□□□□ -1.71
RNF4-211ENST00000509206 MIA3Q5JRA6 1907 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 ASXL3Q9C0F0 2248 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 DSPP15924 2871 aaKnown RBP4.38□□□□□ -1.71
RNF4-211ENST00000509206 A0A0U1RQF3 1178 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 CAPN8A6NHC0 703 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 ESPNB1AK53 854 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 NRG2O14511 850 aaPredicted RBP4.38□□□□□ -1.71
RNF4-211ENST00000509206 BACH1O14867 736 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 KHNYNO15037 678 aaKnown RBP4.38□□□□□ -1.71
RNF4-211ENST00000509206 ZBTB5O15062 677 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 TEX28O15482 410 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 RHOBTB1O94844 696 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 CAVIN2O95810 425 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 PRB1P04280 392 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 SNHG28P0DPA3 235 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 TDGF1P13385 188 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 PLA2G2AP14555 144 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 TMOD1P28289 359 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 NOVP48745 357 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 GLUD2P49448 558 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 SIM1P81133 766 aaPredicted RBP4.38□□□□□ -1.71
RNF4-211ENST00000509206 MRPS9P82933 396 aaKnown RBP4.38□□□□□ -1.71
RNF4-211ENST00000509206 SCAPQ12770 1279 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 ELF2Q15723 593 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 SWI5Q1ZZU3 235 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 ASPRV1Q53RT3 343 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 NOMO2Q5JPE7 1267 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 PPM1LQ5SGD2 360 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 FAM160B1Q5W0V3 765 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 Q6ZNB5 142 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 SND1Q7KZF4 910 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNF4-211ENST00000509206 PLPPR4Q7Z2D5 763 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 WDR5BQ86VZ2 330 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 FAM228AQ86W67 206 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 TMEM173Q86WV6 379 aaPredicted RBP4.38□□□□□ -1.71
RNF4-211ENST00000509206 IQCA1Q86XH1 822 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 HOMER1Q86YM7 354 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 GLYCTKQ8IVS8 523 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms