RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 HYIQ5T013 277 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 RINT1Q6NUQ1 792 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 LLGL2Q6P1M3 1020 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 TMEM184AQ6ZMB5 413 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 CABP7Q86V35 215 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 TMEM173Q86WV6 379 aaPredicted RBP20.55■□□□□ 0.88
UBE3D-207ENST00000509102 CCDC113Q9H0I3 377 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 PDZD7Q9H5P4 517 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 SSX2IPQ9Y2D8 614 aa20.55■□□□□ 0.88
UBE3D-207ENST00000509102 PRG3Q9Y2Y8 225 aaPredicted RBP20.55■□□□□ 0.88
UBE3D-207ENST00000509102 RBM19Q9Y4C8 960 aaKnown RBP20.55■□□□□ 0.88
UBE3D-207ENST00000509102 GUCY2CP25092 1073 aa20.54■□□□□ 0.88
UBE3D-207ENST00000509102 LONP1P36776 959 aaKnown RBP20.54■□□□□ 0.88
UBE3D-207ENST00000509102 ZP2Q05996 745 aa20.54■□□□□ 0.88
UBE3D-207ENST00000509102 TPRNQ4KMQ1 711 aa20.54■□□□□ 0.88
UBE3D-207ENST00000509102 COLGALT2Q8IYK4 626 aa20.54■□□□□ 0.88
UBE3D-207ENST00000509102 KIFC3Q9BVG8 833 aa20.54■□□□□ 0.88
UBE3D-207ENST00000509102 COLEC11Q9BWP8 271 aa20.54■□□□□ 0.88
UBE3D-207ENST00000509102 EMILIN2Q9BXX0 1053 aa20.54■□□□□ 0.88
UBE3D-207ENST00000509102 POLD4Q9HCU8 107 aa20.54■□□□□ 0.88
UBE3D-207ENST00000509102 KMT5AQ9NQR1 393 aa20.54■□□□□ 0.88
UBE3D-207ENST00000509102 IRAK3Q9Y616 596 aa20.54■□□□□ 0.88
UBE3D-207ENST00000509102 URODP06132 367 aa20.53■□□□□ 0.88
UBE3D-207ENST00000509102 NPTX2P47972 431 aa20.53■□□□□ 0.88
UBE3D-207ENST00000509102 SMTNP53814 917 aa20.53■□□□□ 0.88
UBE3D-207ENST00000509102 SF3A1Q15459 793 aaKnown RBP20.53■□□□□ 0.88
UBE3D-207ENST00000509102 ATF7IP2Q5U623 682 aa20.53■□□□□ 0.88
UBE3D-207ENST00000509102 ANKRD54Q6NXT1 300 aa20.53■□□□□ 0.88
UBE3D-207ENST00000509102 C1orf186Q6ZWK4 172 aa20.53■□□□□ 0.88
UBE3D-207ENST00000509102 PPFIBP1Q86W92 1011 aa20.53■□□□□ 0.88
UBE3D-207ENST00000509102 SYT2Q8N9I0 419 aaPredicted RBP20.53■□□□□ 0.88
UBE3D-207ENST00000509102 PLIN2Q99541 437 aa20.53■□□□□ 0.88
UBE3D-207ENST00000509102 RUSC1Q9BVN2 902 aa20.53■□□□□ 0.88
UBE3D-207ENST00000509102 MRPL17Q9NRX2 175 aaKnown RBP20.53■□□□□ 0.88
UBE3D-207ENST00000509102 KLK14Q9P0G3 267 aa20.53■□□□□ 0.88
UBE3D-207ENST00000509102 PLA2G4BP0C869 781 aa20.52■□□□□ 0.88
UBE3D-207ENST00000509102 ALADP13716 330 aa20.52■□□□□ 0.88
UBE3D-207ENST00000509102 SYT1P21579 422 aa20.52■□□□□ 0.88
UBE3D-207ENST00000509102 DSC1Q08554 894 aa20.52■□□□□ 0.88
UBE3D-207ENST00000509102 KIAA1841Q6NSI8 718 aa20.52■□□□□ 0.88
UBE3D-207ENST00000509102 CES5AQ6NT32 575 aa20.52■□□□□ 0.88
UBE3D-207ENST00000509102 KCNK18Q7Z418 384 aa20.52■□□□□ 0.88
UBE3D-207ENST00000509102 VN1R2Q8NFZ6 395 aa20.52■□□□□ 0.88
UBE3D-207ENST00000509102 BCL7CQ8WUZ0 217 aaPredicted RBP20.52■□□□□ 0.88
UBE3D-207ENST00000509102 MRPL4Q9BYD3 311 aaKnown RBP20.52■□□□□ 0.88
UBE3D-207ENST00000509102 TMEM134Q9H6X4 195 aa20.52■□□□□ 0.88
UBE3D-207ENST00000509102 USP15Q9Y4E8 981 aaPredicted RBP20.52■□□□□ 0.88
UBE3D-207ENST00000509102 HCFC2Q9Y5Z7 792 aa20.52■□□□□ 0.88
UBE3D-207ENST00000509102 SPDYE4A6NLX3 237 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 H0YCG3 227 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 B4GALT3O60512 393 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 CLASP2O75122 1294 aaKnown RBP20.51■□□□□ 0.87
UBE3D-207ENST00000509102 SOD2P04179 222 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 HSP90AA1P07900 732 aaKnown RBP20.51■□□□□ 0.87
UBE3D-207ENST00000509102 STRN3Q13033 797 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 TMEM119Q4V9L6 283 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 ELMSAN1Q6PJG2 1045 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 AUTS2Q8WXX7 1259 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 PNMA5Q96PV4 448 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 DZANK1Q9NVP4 752 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 SNTG2Q9NY99 539 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 LARSQ9P2J5 1176 aaKnown RBP20.51■□□□□ 0.87
UBE3D-207ENST00000509102 TNFSF13BQ9Y275 285 aa20.51■□□□□ 0.87
UBE3D-207ENST00000509102 RECQL4O94761 1208 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 THP07101 528 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 PLS3P13797 630 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 YARSP54577 528 aaKnown RBP20.5■□□□□ 0.87
UBE3D-207ENST00000509102 RBM10P98175 930 aaKnown RBP20.5■□□□□ 0.87
UBE3D-207ENST00000509102 RAD51AP2Q09MP3 1159 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 KCNC3Q14003 757 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 PTPN14Q15678 1187 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 HSCBQ8IWL3 235 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 DAW1Q8N136 415 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 TCHPQ9BT92 498 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 CD320Q9NPF0 282 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 FOXD4L1Q9NU39 408 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 MIOSQ9NXC5 875 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 ARHGAP28Q9P2N2 729 aa20.5■□□□□ 0.87
UBE3D-207ENST00000509102 C19orf67A6NJJ6 358 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 TTLL13PA6NNM8 815 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 KRT18P05783 430 aaKnown RBP20.49■□□□□ 0.87
UBE3D-207ENST00000509102 KLRC2P26717 231 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 TXLNAP40222 546 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 GLUD2P49448 558 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 SLC12A3P55017 1021 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 ITIH3Q06033 890 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 TUSC3Q13454 348 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 ZNF568Q3ZCX4 644 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 SPIRE2Q8WWL2 714 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 HERC2P3Q9BVR0 1158 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 CCDC94Q9BW85 323 aaPredicted RBP20.49■□□□□ 0.87
UBE3D-207ENST00000509102 PHF7Q9BWX1 381 aaPredicted RBP20.49■□□□□ 0.87
UBE3D-207ENST00000509102 ZSCAN16Q9H4T2 348 aaPredicted RBP20.49■□□□□ 0.87
UBE3D-207ENST00000509102 TOPORSQ9NS56 1045 aaPredicted RBP20.49■□□□□ 0.87
UBE3D-207ENST00000509102 MARCH5Q9NX47 278 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 DPP7Q9UHL4 492 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 GDAQ9Y2T3 454 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 GTF3C3Q9Y5Q9 886 aa20.49■□□□□ 0.87
UBE3D-207ENST00000509102 TDRD15B5MCY1 1934 aaKnown RBP20.49■□□□□ 0.87
UBE3D-207ENST00000509102 SFI1A8K8P3 1242 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms