RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 AMHR2Q16671 573 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 MAN2A1Q16706 1144 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 DCAF4L1Q3SXM0 396 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 ZNF568Q3ZCX4 644 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 SLC39A4Q6P5W5 647 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 NOTUMQ6P988 496 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 SLC39A5Q6ZMH5 540 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 INTS8Q75QN2 995 aaKnown RBP11.33□□□□□ -0.6
RFC1-211ENST00000509084 ANKRD33Q7Z3H0 272 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 NECAB2Q7Z6G3 386 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 IRF2BP1Q8IU81 584 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 FAM186BQ8IYM0 893 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 GPD1LQ8N335 351 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 DHX38Q92620 1227 aaKnown RBP11.33□□□□□ -0.6
RFC1-211ENST00000509084 CBWD1Q9BRT8 395 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 TUBGCP2Q9BSJ2 902 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 TCHPQ9BT92 498 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 MSTO1Q9BUK6 570 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 TRIM5Q9C035 493 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 MINDY3Q9H8M7 445 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 AGPAT5Q9NUQ2 364 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 ANKFY1Q9P2R3 1169 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 ARMCX3Q9UH62 379 aaPredicted RBP11.33□□□□□ -0.6
RFC1-211ENST00000509084 AGO2Q9UKV8 859 aaKnown RBP11.33□□□□□ -0.6
RFC1-211ENST00000509084 A0A0B4J269 797 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 LRRC10BA6NIK2 292 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 GPR182O15218 404 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 OGTO15294 1046 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 EXTL3O43909 919 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 RPS6KA5O75582 802 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 AKAP3O75969 853 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 CTSHP09668 335 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 MCF2P10911 925 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 CKBP12277 381 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 ATP1A3P13637 1013 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 ARF4P18085 180 aaPredicted RBP11.32□□□□□ -0.6
RFC1-211ENST00000509084 ADSSP30520 456 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 UBASH3AP57075 661 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 KRT31Q15323 416 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 HSP90AA4PQ58FG1 418 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 TRIM59Q8IWR1 403 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 TNS4Q8IZW8 715 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 WNT8BQ93098 351 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 FBXL18Q96ME1 805 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 TRPV6Q9H1D0 765 aa11.32□□□□□ -0.6
RFC1-211ENST00000509084 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.32□□□□□ -0.6
RFC1-211ENST00000509084 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 A0A1B0GUA9 196 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 ZNF233A6NK53 670 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 TISP43B9A030 160 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 B4GALT5O43286 388 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 STX10O60499 249 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 PQBP1O60828 265 aaKnown RBP11.31□□□□□ -0.6
RFC1-211ENST00000509084 CHRNA1P02708 482 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 EDN1P05305 212 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 IQCF3P0C7M6 154 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 COPB1P53618 953 aaKnown RBP11.31□□□□□ -0.6
RFC1-211ENST00000509084 BFSP1Q12934 665 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 PAK2Q13177 524 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 SURF1Q15526 300 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 SNRNP35Q16560 246 aaKnown RBP11.31□□□□□ -0.6
RFC1-211ENST00000509084 COL13A1Q5TAT6 717 aaPredicted RBP11.31□□□□□ -0.6
RFC1-211ENST00000509084 SLC27A1Q6PCB7 646 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.31□□□□□ -0.6
RFC1-211ENST00000509084 CREBRFQ8IUR6 639 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 MRFAP1L1Q96HT8 127 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 NOC4LQ9BVI4 516 aaKnown RBP11.31□□□□□ -0.6
RFC1-211ENST00000509084 IKZF4Q9H2S9 585 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 PCIF1Q9H4Z3 704 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 PDZD7Q9H5P4 517 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 CDHR5Q9HBB8 845 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 PTPRHQ9HD43 1115 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 CHST12Q9NRB3 414 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 TAB2Q9NYJ8 693 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 IFNKQ9P0W0 207 aa11.31□□□□□ -0.6
RFC1-211ENST00000509084 PCNTO95613 3336 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 LGALS16A8MUM7 142 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 ABLIM1O14639 778 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 N4BP1O75113 896 aaKnown RBP11.3□□□□□ -0.6
RFC1-211ENST00000509084 CSDE1O75534 798 aaKnown RBP11.3□□□□□ -0.6
RFC1-211ENST00000509084 SELPP16109 830 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 CDC25BP30305 580 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 CASP4P49662 377 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 ZNF75DP51815 510 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 VWA3BQ502W6 1294 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 FBXO47Q5MNV8 452 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 FKBP15Q5T1M5 1219 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 ZNF618Q5T7W0 954 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 LRRC8DQ7L1W4 858 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 APTXQ7Z2E3 356 aaKnown RBP11.3□□□□□ -0.6
RFC1-211ENST00000509084 FAM228AQ86W67 206 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 BRSK2Q8IWQ3 736 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 HACE1Q8IYU2 909 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 DIS3LQ8TF46 1054 aaKnown RBP11.3□□□□□ -0.6
RFC1-211ENST00000509084 TMEM40Q8WWA1 233 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 SAAL1Q96ER3 474 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 EEF2KMTQ96G04 330 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 PAWRQ96IZ0 340 aaKnown RBP11.3□□□□□ -0.6
RFC1-211ENST00000509084 FAM213AQ9BRX8 229 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms