RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 SEPT9Q9UHD8 586 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 DNAJC12Q9UKB3 198 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 NCANO14594 1321 aa12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 PGRMC1O00264 195 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 OATP04181 439 aa12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 PPFIA1Q13136 1202 aa12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 DRAP1Q14919 205 aaPredicted RBP12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 METTL7BQ6UX53 244 aa12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 FAM76AQ8TAV0 307 aa12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 HHIPL1Q96JK4 782 aa12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 MS4A4AQ96JQ5 239 aa12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 KRT12Q99456 494 aa12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 DHX33Q9H6R0 707 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 SUCLA2Q9P2R7 463 aaPredicted RBP12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 AJAP1Q9UKB5 411 aaPredicted RBP12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 PACSIN2Q9UNF0 486 aaPredicted RBP12.5□□□□□ -0.41
PRPF40B-203ENST00000508736 GSTTP1A0A1W2PQM5 241 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 DENND3A2RUS2 1198 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 GOLGA6CA6NDK9 693 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 CCDC169A6NNP5 214 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 FAM155AB1AL88 458 aaPredicted RBP12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 DDX3XO00571 662 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 PEX10O60683 326 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 RPS6KA5O75582 802 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 SLC10A3P09131 477 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 GOLGA6DP0CG33 693 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 CETPP11597 493 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 ATP4AP20648 1035 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 CNGA1P29973 690 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 VAMP7P51809 220 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 HNRNPH2P55795 449 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 GUCY2DQ02846 1103 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 BRDTQ58F21 947 aaPredicted RBP12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 FAM160B1Q5W0V3 765 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 GJB7Q6PEY0 223 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 SLFN11Q7Z7L1 901 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 EIF1ADQ8N9N8 165 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 WHAMMQ8TF30 809 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 CTNNBL1Q8WYA6 563 aaPredicted RBP12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 RFFLQ8WZ73 363 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 IFT74Q96LB3 600 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 FGD4Q96M96 766 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 FBXL18Q96ME1 805 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 CBWD1Q9BRT8 395 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 GOLGA6AQ9NYA3 693 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 ARHGAP28Q9P2N2 729 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 USP20Q9Y2K6 914 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 TELO2Q9Y4R8 837 aa12.49□□□□□ -0.41
PRPF40B-203ENST00000508736 CCL15-CCL14A0A0B4J2E2 113 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 TMCO5BA8MYB1 307 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 CCDC188H7C350 402 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 CEP104O60308 925 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 TMEM253P0C7T8 217 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 TRIM49P0CI25 452 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 TRIM49CP0CI26 452 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 RFC5P40937 340 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 C1QTNF8P60827 252 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 ERVK-9P63128 1117 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 EMC2Q15006 297 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 CCL15Q16663 113 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 Q3C1V9 767 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 CBWD6Q4V339 395 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 CBWD3Q5JTY5 395 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 CBWD5Q5RIA9 395 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 DAAM2Q86T65 1068 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 SLC30A5Q8TAD4 765 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 SEPT1Q8WYJ6 367 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 BSNDQ8WZ55 320 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 CEP89Q96ST8 783 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 MMP19Q99542 508 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 DOCK5Q9H7D0 1870 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 EPB41L5Q9HCM4 733 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 NRBP2Q9NSY0 501 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 TMEM59LQ9UK28 342 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 AGPSO00116 658 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 GARTP22102 1010 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 POLGP54098 1239 aaPredicted RBP12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 GALCP54803 685 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 SP4Q02446 784 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 TARBP2Q15633 366 aaKnown RBP12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 CLUL1Q15846 466 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 MTERF2Q49AM1 385 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 MREGQ8N565 214 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 LMO3Q8TAP4 145 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 BRI3BPQ8WY22 251 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 FAM167AQ96KS9 214 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 CAPNS2Q96L46 248 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 SH3GL2Q99962 352 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 PORCNQ9H237 461 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 AMFRQ9UKV5 643 aa12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 DIS3Q9Y2L1 958 aaKnown RBP12.48□□□□□ -0.41
PRPF40B-203ENST00000508736 ADGRA3Q8IWK6 1321 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 MYH9P35579 1960 aaKnown RBP12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 KIAA0391O15091 583 aaKnown RBP12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 GLI1P08151 1106 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 TNFAIP3P21580 790 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 ADSSP30520 456 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 NAMPTP43490 491 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 STAT5BP51692 787 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms