RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 C11orf84Q9BUA3 381 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 CHMP4AQ9BY43 222 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 TMX4Q9H1E5 349 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 VPS33BQ9H267 617 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 HACL1Q9UJ83 578 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 WASF3Q9UPY6 502 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 ANKRD36CQ5JPF3 1778 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 IL16Q14005 1332 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 CEP350Q5VT06 3117 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 PRAMEF25A6NGN4 478 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 B4E1Z4 1266 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 FFAR3O14843 346 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 PPIP5K2O43314 1243 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 SMARCA5O60264 1052 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 DDX58O95786 925 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 PCCAP05165 728 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 ADRB1P08588 477 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 EPHX2P34913 555 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 FLT3P36888 993 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 EPHA5P54756 1037 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 GYS2P54840 703 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 CXCL9Q07325 125 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 KIAA2012Q0VF49 1180 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 SEC23AQ15436 765 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 TWISTNBQ3B726 338 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 TCERG1LQ5VWI1 586 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 KSR2Q6VAB6 950 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 LIPIQ6XZB0 460 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 PRRT2Q7Z6L0 340 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 KIAA0907Q7Z7F0 614 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 PNMA8AQ86V59 439 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 LRRTM3Q86VH5 581 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 FAM9BQ8IZU0 186 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 CCDC191Q8NCU4 936 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 TTLL11Q8NHH1 800 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 WNK4Q96J92 1243 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 MYD88Q99836 296 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 NGRNQ9NPE2 291 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 MAGEC2Q9UBF1 373 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 CROTQ9UKG9 612 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 MAP3K2Q9Y2U5 619 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 CACNA1FO60840 1977 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 ZNF521Q96K83 1311 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 PASKQ96RG2 1323 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 FANCIQ9NVI1 1328 aa4.41□□□□□ -1.7
UBE2D3-226ENST00000508635 LAMB2P55268 1798 aa4.4□□□□□ -1.7
UBE2D3-226ENST00000508635 ADAMTSL1Q8N6G6 1762 aa4.4□□□□□ -1.7
UBE2D3-226ENST00000508635 SCN4AP35499 1836 aa4.4□□□□□ -1.7
UBE2D3-226ENST00000508635 SLC12A8A0AV02 714 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 PI4KAP2A4QPH2 592 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 IGKV5-2P06315 115 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 HSP90B1P14625 803 aaKnown RBP4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 EPS15P42566 896 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 GLRBP48167 497 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 RPS8P62241 208 aaKnown RBP4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 GPSM2P81274 684 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 ADAM9Q13443 819 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 TMEM132BQ14DG7 1078 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 PCBP1Q15365 356 aaKnown RBP eCLIP4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 VWA3BQ502W6 1294 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 TM4SF20Q53R12 229 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 PLEKHG4Q58EX7 1191 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 FIGNQ5HY92 759 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 VASNQ6EMK4 673 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 PKN3Q6P5Z2 889 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 HHIPL2Q6UWX4 724 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 G2E3Q7L622 706 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 PROSER1Q86XN7 944 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 TMEM151BQ8IW70 566 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 TRMT2AQ8IZ69 625 aaKnown RBP4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 LINC00482Q8N8I6 264 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 PI4KAP1Q8N8J0 262 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 KYQ8NBH2 561 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 CXorf38Q8TB03 319 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 TARS2Q9BW92 718 aaKnown RBP4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 STK31Q9BXU1 1019 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 CABP5Q9NP86 173 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 SLC39A2Q9NP94 309 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 SPATA6Q9NWH7 488 aaPredicted RBP4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 CWC25Q9NXE8 425 aaPredicted RBP4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 POLLQ9UGP5 575 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 COL4A1P02462 1669 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 DDX60Q8IY21 1712 aaKnown RBP4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 CDHR2Q9BYE9 1310 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 DUOX1Q9NRD9 1551 aa4.4□□□□□ -1.71
UBE2D3-226ENST00000508635 LRRC37AA6NMS7 1700 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 LTBP1Q14766 1721 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 PTPDC1A2A3K4 754 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 YDJCA8MPS7 323 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 TRAF5O00463 557 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 PDE8AO60658 829 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 CLASP2O75122 1294 aaKnown RBP4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 NPTXRO95502 500 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 MYCLP1P12525 358 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 BMP7P18075 431 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 HSD3B2P26439 372 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 GMPSP49915 693 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 IRF9Q00978 393 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 PFKPQ01813 784 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 EXOSC9Q06265 439 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms