RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 MTHFD2P13995 350 aa7.31□□□□□ -1.24
TOPBP1-206ENST00000508524 CRHR1P34998 444 aa7.31□□□□□ -1.24
TOPBP1-206ENST00000508524 FHL2Q14192 279 aa7.31□□□□□ -1.24
TOPBP1-206ENST00000508524 TOR2AQ5JU69 321 aa7.31□□□□□ -1.24
TOPBP1-206ENST00000508524 ANKS6Q68DC2 871 aa7.31□□□□□ -1.24
TOPBP1-206ENST00000508524 AMER2Q8N7J2 671 aa7.31□□□□□ -1.24
TOPBP1-206ENST00000508524 RIN2Q8WYP3 895 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-206ENST00000508524 CEP95Q96GE4 821 aa7.31□□□□□ -1.24
TOPBP1-206ENST00000508524 REXO2Q9Y3B8 237 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-206ENST00000508524 K7ESF4 209 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 PHF2O75151 1096 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 MAKP20794 623 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 NR4A1P22736 598 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 HMGA2P52926 109 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 PRAMEF14Q5SWL7 426 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 ZNF276Q8N554 614 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 ATL2Q8NHH9 583 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 CLIP3Q96DZ5 547 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 SORCS3Q9UPU3 1222 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 HDAC5Q9UQL6 1122 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 PHLDB1Q86UU1 1377 aa7.3□□□□□ -1.24
TOPBP1-206ENST00000508524 B5MCH6 92 aa7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 TRIM24O15164 1050 aa7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 AKR1B10O60218 316 aa7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 ANO4Q32M45 955 aa7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 MFSD14BQ5SR56 506 aa7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 Q6ZVL8 140 aa7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 GPR156Q8NFN8 814 aa7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 SLC25A43Q8WUT9 341 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 NEU4Q8WWR8 484 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 LARP4BQ92615 738 aaKnown RBP7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 HOXB13Q92826 284 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 FATE1Q969F0 183 aa7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 NDC1Q9BTX1 674 aa7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 TRIM8Q9BZR9 551 aa7.29□□□□□ -1.24
TOPBP1-206ENST00000508524 AHRRA9YTQ3 701 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 PRR5-ARHGAP8B1AHC4 643 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 RPS6KA4O75676 772 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 ADH4P08319 380 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 HSP90B1P14625 803 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 ADSLP30566 484 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 APOBEC3AP31941 199 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 MTNR1BP49286 362 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 PPP3CAQ08209 521 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 PDZD4Q76G19 769 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 RHOUQ7L0Q8 258 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 DDX42Q86XP3 938 aaKnown RBP eCLIP7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 SYT12Q8IV01 421 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 TRMT2AQ8IZ69 625 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 REPS2Q8NFH8 660 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 CPT1CQ8TCG5 803 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 ACE2Q9BYF1 805 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 KCNH6Q9H252 994 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 GREM2Q9H772 168 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 NRDE2Q9H7Z3 1164 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 SPC25Q9HBM1 224 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 DMRT3Q9NQL9 472 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 DNAJC28Q9NX36 388 aa7.28□□□□□ -1.24
TOPBP1-206ENST00000508524 LEFTY2O00292 366 aa7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 WNT10BO00744 389 aa7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 SCAF4O95104 1147 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 ZFP36P26651 326 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 FLT3LGP49771 235 aa7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 DRICH1Q6PGQ1 229 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 ZNF627Q7L945 461 aa7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 OR7D4Q8NG98 312 aa7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 LENG9Q96B70 501 aa7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 ZNF768Q9H5H4 540 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 BCO1Q9HAY6 547 aa7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 RBM12Q9NTZ6 932 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 MCM8Q9UJA3 840 aa7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 CLCA2Q9UQC9 943 aa7.27□□□□□ -1.25
TOPBP1-206ENST00000508524 ATRNL1Q5VV63 1379 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 CADPSQ9ULU8 1353 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 TBKBP1A7MCY6 615 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 OSMP13725 252 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 ECHS1P30084 290 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 PTGS2P35354 604 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 MCAMP43121 646 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 MALLQ13021 153 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 BMT2Q1RMZ1 405 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 MUM1L1Q5H9M0 696 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 MBNL2Q5VZF2 373 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 Q6ZPA2 131 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 ZNF572Q7Z3I7 529 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 MRGPREQ86SM8 312 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 SLC35B2Q8TB61 432 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 SPON1Q9HCB6 807 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 EIF2B4Q9UI10 523 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 CHST2Q9Y4C5 530 aa7.26□□□□□ -1.25
TOPBP1-206ENST00000508524 SBNO2Q9Y2G9 1366 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 RECQL4O94761 1208 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 SREBF1P36956 1147 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 SLC5A3P53794 718 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 FAM189BP81408 668 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 KLF1Q13351 362 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 LDLRAD3Q86YD5 345 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 CNTD1Q8N815 330 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 RNF169Q8NCN4 708 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 OR10H5Q8NGA6 315 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms