RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 RASEFQ8IZ41 740 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 AFAP1L2Q8N4X5 818 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 MFRPQ9BY79 579 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SH3GLB2Q9NR46 395 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 EHD2Q9NZN4 543 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 MRPS17Q9Y2R5 130 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 BRCA1P38398 1863 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 POM121CA8CG34 1229 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 FGF19O95750 216 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ITGBL1O95965 494 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 MCM3P25205 808 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 HOXA7P31268 230 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 HSPA4P34932 840 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 NLRP11P59045 1033 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 RPS6P62753 249 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 GRB14Q14449 540 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PGM5Q15124 567 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 USP17L6PQ6QN14 398 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 CPA6Q8N4T0 437 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PPTC7Q8NI37 304 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 HELQQ8TDG4 1101 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 CPVLQ9H3G5 476 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ZBTB40Q9NUA8 1239 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ZSWIM5Q9P217 1185 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 DDX41Q9UJV9 622 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ANAPC5Q9UJX4 755 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 NRCAMQ92823 1304 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 CASTOR2A6NHX0 329 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 CTAGE5O15320 804 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 E2F6O75461 281 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SPATA31D3P0C874 917 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PDHBP11177 359 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 CHMLP26374 656 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PPM1AP35813 382 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 TRAPPC10P48553 1259 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SEC13P55735 322 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 CNTN2Q02246 1040 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF543Q08ER8 600 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PTK7Q13308 1070 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 RABL6Q3YEC7 729 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SPATA31D4Q6ZUB0 917 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 CCDC149Q6ZUS6 474 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 RNF149Q8NC42 400 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 TTC8Q8TAM2 541 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 CFAP36Q96G28 342 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 RAB3IPQ96QF0 476 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ZIC5Q96T25 663 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SPOCK3Q9BQ16 436 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 MIS12Q9H081 205 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 NSUN3Q9H649 340 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PDS5AQ29RF7 1337 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ADGRA2Q96PE1 1338 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ABHD14A-ACY1A0A1B0GW23 586 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 K7ERI5 159 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SPTLC2O15270 562 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ZSCAN12O43309 604 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PPP1R37O75864 691 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 CASQ1P31415 396 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SHMT1P34896 483 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SURF1Q15526 300 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 GRIK5Q16478 980 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 GPAT2Q6NUI2 795 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 CASC4Q6P4E1 433 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 OR6B3Q8NGW1 331 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 GDAP1Q8TB36 358 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 RASGRP4Q8TDF6 673 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 FBF1Q8TES7 1133 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 C8orf48Q96LL4 319 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ADAM2Q99965 735 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 MMTAG2Q9BU76 263 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 FAM86C2PA6NEL3 165 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 HNRNPDLO14979 420 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PEX10O60683 326 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 ATG7O95352 703 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PLEKHA8P1O95397 391 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PRKCBP05771 671 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 NR3C2P08235 984 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PEX3P56589 373 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PSMC5P62195 406 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PRKCEQ02156 737 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SV2CQ496J9 727 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 TMEM31Q5JXX7 168 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 IRAK1BP1Q5VVH5 260 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 DIS3LQ8TF46 1054 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 FRS2Q8WU20 508 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 GMCL1Q96IK5 515 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 SRPK1Q96SB4 655 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 MXRA8Q9BRK3 442 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 TLR9Q9NR96 1032 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 VTI1BQ9UEU0 232 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 CDV3Q9UKY7 258 aaKnown RBP3.18□□□□□ -1.9
NEDD4-208ENST00000508342 KIAA1024Q9UPX6 916 aa3.18□□□□□ -1.9
NEDD4-208ENST00000508342 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.17□□□□□ -1.9
NEDD4-208ENST00000508342 GSG1L2A8MUP6 293 aa3.17□□□□□ -1.9
NEDD4-208ENST00000508342 ZW10O43264 779 aa3.17□□□□□ -1.9
NEDD4-208ENST00000508342 LAMTOR5O43504 91 aa3.17□□□□□ -1.9
NEDD4-208ENST00000508342 ADH1AP07327 375 aa3.17□□□□□ -1.9
NEDD4-208ENST00000508342 RASA1P20936 1047 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms