RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 C9orf78Q9NZ63 289 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 APOBEC2Q9Y235 224 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 TMA7Q9Y2S6 64 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 A2MP01023 1474 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 INO80Q9ULG1 1556 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 XPOTO43592 962 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 SEC24DO94855 1032 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 AFPP02771 609 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 GM2AP17900 193 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 CD53P19397 219 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 PRKAR1BP31321 381 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 ADCY8P40145 1251 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 RPL5P46777 297 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 EIF2B2P49770 351 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 GOLGA8FQ08AF8 430 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 GOLGA8DPQ0D2H9 430 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 NEK5Q6P3R8 708 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 CORO6Q6QEF8 472 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 SLC4A10Q6U841 1118 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 MRPL10Q7Z7H8 261 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 FERMT3Q86UX7 667 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 SLC38A6Q8IZM9 456 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 NATD1Q8N6N6 113 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 PAF1Q8N7H5 531 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 PCYOX1LQ8NBM8 494 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 TTLL11Q8NHH1 800 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 HERVK_113Q902F9 699 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 NRBF2Q96F24 287 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 PSD2Q9BQI7 771 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 TRIM55Q9BYV6 548 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 DNAI2Q9GZS0 605 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 ABCG4Q9H172 646 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 EHD1Q9H4M9 534 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 NLRC4Q9NPP4 1024 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 C12orf4Q9NQ89 552 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 GMIPQ9P107 970 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 STK38LQ9Y2H1 464 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 ARL2BPQ9Y2Y0 163 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 CYP46A1Q9Y6A2 500 aa11.5□□□□□ -0.57
PDLIM5-210ENST00000508216 MAP3K15Q6ZN16 1313 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 ATP7AQ04656 1500 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 C19orf81C9J6K1 198 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 PDE2AO00408 941 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 FOXN3O00409 490 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 KRT75O95678 551 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 MYCP01106 439 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 ATP1A1P05023 1023 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 IDEP14735 1019 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 TCF3P15923 654 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 CRABP2P29373 138 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 HPDP32754 393 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 MAPKAPK2P49137 400 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 RASSF2P50749 326 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 EIF3BP55884 814 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 OLR1P78380 273 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 XIAPP98170 497 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 PRKCEQ02156 737 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 TCIRG1Q13488 830 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 CROCCP2Q86T23 111 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 CREG2Q8IUH2 290 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 ERI1Q8IV48 349 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 ZNF687Q8N1G0 1237 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 MRPL50Q8N5N7 158 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 SPATA4Q8NEY3 305 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 AFG1LQ8WV93 481 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 ZFRQ96KR1 1074 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 LRRC1Q9BTT6 524 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 MRPL9Q9BYD2 267 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 LSG1Q9H089 658 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 TRPV6Q9H1D0 765 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 THAP9Q9H5L6 903 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 C8orf4Q9NR00 106 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 TBC1D23Q9NUY8 699 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 AIPL1Q9NZN9 384 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 GABBR1Q9UBS5 961 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 CNOT8Q9UFF9 292 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 PRKAG3Q9UGI9 489 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 FAF1Q9UNN5 650 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 ANGPTL3Q9Y5C1 460 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 POTEB3A0JP26 581 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 AREL1O15033 823 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 AQP9O43315 295 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 CTNND1O60716 968 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 COL6A1P12109 1028 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 ZKSCAN1P17029 563 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 TCP1P17987 556 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 HSD17B2P37059 387 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 MMP13P45452 471 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 TAGLNQ01995 201 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 ZNF844Q08AG5 666 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 TJAP1Q5JTD0 557 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 C6orf132Q5T0Z8 1188 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 DCLRE1AQ6PJP8 1040 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 POTEBQ6S5H4 581 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 IDO2Q6ZQW0 420 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 DCDC5Q6ZRR9 648 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 USP43Q70EL4 1123 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 HEATR4Q86WZ0 1026 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 NUTM2AQ8IVF1 878 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 RASSF5Q8WWW0 418 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms