RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 FNIP2Q9P278 1114 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 SAMM50Q9Y512 469 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 RBM8AQ9Y5S9 174 aaKnown RBP10.27□□□□□ -0.77
CAST-220ENST00000508117 C2CD2LO14523 706 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 SLC30A4O14863 429 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 NCAM2O15394 837 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 GAS2O43903 313 aaKnown RBP10.26□□□□□ -0.77
CAST-220ENST00000508117 GSPT1P15170 499 aaKnown RBP10.26□□□□□ -0.77
CAST-220ENST00000508117 JAK3P52333 1124 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 CREMQ03060 361 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 DSC1Q08554 894 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 SNW1Q13573 536 aaKnown RBP10.26□□□□□ -0.77
CAST-220ENST00000508117 LONRF3Q496Y0 759 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 SLC44A4Q53GD3 710 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 ZBTB41Q5SVQ8 909 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 TTC22Q5TAA0 569 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 SYNE3Q6ZMZ3 975 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 GET4Q7L5D6 327 aaPredicted RBP10.26□□□□□ -0.77
CAST-220ENST00000508117 TAS1R1Q7RTX1 841 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 CATSPER4Q7RTX7 472 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 MICU3Q86XE3 530 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 COLGALT2Q8IYK4 626 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 CNNM3Q8NE01 707 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 RDM1Q8NG50 284 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 NETO1Q8TDF5 533 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 FGF14Q92915 247 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 LENG9Q96B70 501 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 MBOAT7Q96N66 472 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 RIT2Q99578 217 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 RPP25Q9BUL9 199 aaKnown RBP10.26□□□□□ -0.77
CAST-220ENST00000508117 LTB4R2Q9NPC1 389 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 GMEB2Q9UKD1 530 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 CDH7Q9ULB5 785 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 USP18Q9UMW8 372 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 PCDHGA10Q9Y5H3 936 aa10.26□□□□□ -0.77
CAST-220ENST00000508117 V9GY48 417 aaPredicted RBP10.26□□□□□ -0.77
CAST-220ENST00000508117 FAM170BA6NMN3 283 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 TGM5O43548 720 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 ZMYND10O75800 440 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 IGHDP01880 384 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 NCLP19338 710 aaKnown RBP10.25□□□□□ -0.77
CAST-220ENST00000508117 FSHRP23945 695 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 AFF1P51825 1210 aaKnown RBP10.25□□□□□ -0.77
CAST-220ENST00000508117 UBXN2BQ14CS0 331 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 UGCGQ16739 394 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 PRR16Q569H4 304 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 XKR3Q5GH77 459 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 JAKMIP3Q5VZ66 844 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 APOA5Q6Q788 366 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 PARM1Q6UWI2 310 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 JPH2Q9BR39 696 aaPredicted RBP10.25□□□□□ -0.77
CAST-220ENST00000508117 ZMYND12Q9H0C1 365 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 IFT122Q9HBG6 1241 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 PARD6AQ9NPB6 346 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 SUCLA2Q9P2R7 463 aaPredicted RBP10.25□□□□□ -0.77
CAST-220ENST00000508117 MTF2Q9Y483 593 aaPredicted RBP10.25□□□□□ -0.77
CAST-220ENST00000508117 TDRD15B5MCY1 1934 aaKnown RBP10.25□□□□□ -0.77
CAST-220ENST00000508117 F5P12259 2224 aa10.25□□□□□ -0.77
CAST-220ENST00000508117 MAFO75444 373 aaPredicted RBP10.24□□□□□ -0.77
CAST-220ENST00000508117 STBD1O95210 358 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 POMCP01189 267 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 POU2F2P09086 479 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 HNRNPA1P09651 372 aaKnown RBP eCLIP10.24□□□□□ -0.77
CAST-220ENST00000508117 HOXA9P31269 272 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 RCAN1P53805 252 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 NRLP54845 237 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 PFKFB3Q16875 520 aaPredicted RBP10.24□□□□□ -0.77
CAST-220ENST00000508117 PPM1JQ5JR12 505 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 UBXN11Q5T124 520 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 LAIR1Q6GTX8 287 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 SRGAP1Q7Z6B7 1085 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 RAB11FIP4Q86YS3 637 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 RHPN2Q8IUC4 686 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 REXO1Q8N1G1 1221 aaKnown RBP10.24□□□□□ -0.77
CAST-220ENST00000508117 CELF5Q8N6W0 485 aaKnown RBP10.24□□□□□ -0.77
CAST-220ENST00000508117 SPRYD3Q8NCJ5 442 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 EXOC6Q8TAG9 804 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 DDX1Q92499 740 aaKnown RBP10.24□□□□□ -0.77
CAST-220ENST00000508117 CHAMP1Q96JM3 812 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 IER2Q9BTL4 223 aa10.24□□□□□ -0.77
CAST-220ENST00000508117 MRPS17Q9Y2R5 130 aaKnown RBP10.24□□□□□ -0.77
CAST-220ENST00000508117 PRG3Q9Y2Y8 225 aaPredicted RBP10.24□□□□□ -0.77
CAST-220ENST00000508117 RALGAPA1Q6GYQ0 2036 aa10.23□□□□□ -0.77
CAST-220ENST00000508117 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
CAST-220ENST00000508117 DPYSL4O14531 572 aa10.23□□□□□ -0.77
CAST-220ENST00000508117 MSH4O15457 936 aa10.23□□□□□ -0.77
CAST-220ENST00000508117 FOXD2O60548 495 aaPredicted RBP10.23□□□□□ -0.77
CAST-220ENST00000508117 GAS7O60861 476 aa10.23□□□□□ -0.77
CAST-220ENST00000508117 NR1I2O75469 434 aa10.23□□□□□ -0.77
CAST-220ENST00000508117 CENPBP07199 599 aaPredicted RBP10.23□□□□□ -0.77
CAST-220ENST00000508117 RETP07949 1114 aa10.23□□□□□ -0.77
CAST-220ENST00000508117 SPATA31D3P0C874 917 aa10.23□□□□□ -0.77
CAST-220ENST00000508117 TDGF1P13385 188 aa10.23□□□□□ -0.77
CAST-220ENST00000508117 HOXA11P31270 313 aaPredicted RBP10.23□□□□□ -0.77
CAST-220ENST00000508117 OR1G1P47890 313 aa10.23□□□□□ -0.77
CAST-220ENST00000508117 FZD5Q13467 585 aa10.23□□□□□ -0.77
CAST-220ENST00000508117 CAMK2BQ13554 666 aa10.23□□□□□ -0.77
CAST-220ENST00000508117 COL9A3Q14050 684 aaPredicted RBP10.23□□□□□ -0.77
CAST-220ENST00000508117 PCBP1Q15365 356 aaKnown RBP eCLIP10.23□□□□□ -0.77
CAST-220ENST00000508117 RTN1Q16799 776 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms