RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 AP1B1Q10567 949 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 TRADDQ15628 312 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 PDXDC2PQ6P474 469 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 DLK2Q6UY11 383 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 ADSSL1Q8N142 457 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 ATP11CQ8NB49 1132 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 NEDD1Q8NHV4 660 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 DDX27Q96GQ7 796 aaKnown RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 HIC2Q96JB3 615 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 TUBGCP5Q96RT8 1024 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 CPVLQ9H3G5 476 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 METTL14Q9HCE5 456 aaKnown RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 WDR70Q9NW82 654 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 GPRC5DQ9NZD1 345 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 PTTG2Q9NZH5 202 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 SEC63Q9UGP8 760 aaKnown RBP6.58□□□□□ -1.36
KDM3B-204ENST00000507996 STK38LQ9Y2H1 464 aa6.58□□□□□ -1.36
KDM3B-204ENST00000507996 SMIM31A0A1B0GVY4 71 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 GH2P01242 217 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 CXCR5P32302 372 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 SESN3P58005 492 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 MAP7Q14244 749 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 ABCB5Q2M3G0 1257 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 USP17L2Q6R6M4 530 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 CCDC84Q86UT8 332 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 DGKHQ86XP1 1220 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 MYOCDQ8IZQ8 938 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 NAT14Q8WUY8 206 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 WDR60Q8WVS4 1066 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 UBLCP1Q8WVY7 318 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 MTMR8Q96EF0 704 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 PRMT1Q99873 361 aaKnown RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 POLR3CQ9BUI4 534 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 DEFB129Q9H1M3 183 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 CABP5Q9NP86 173 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 TIMMDC1Q9NPL8 285 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 FAM217BQ9NTX9 383 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 GGA3Q9NZ52 723 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 LNPEPQ9UIQ6 1025 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 SALL4Q9UJQ4 1053 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 PNMA3Q9UL41 463 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 ROBO3Q96MS0 1386 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 LAMB1P07942 1786 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 CETN3O15182 167 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 TROVE2P10155 538 aaKnown RBP eCLIP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 HDAC4P56524 1084 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 RAB15P59190 212 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 ZNF280AP59817 542 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 TROAPQ12815 778 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 GIT2Q14161 759 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 RCN2Q14257 317 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 NAB2Q15742 525 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 ZYXQ15942 572 aaKnown RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 EAPPQ56P03 285 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 C6orf118Q5T5N4 469 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 RRAGBQ5VZM2 374 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 MAEAQ7L5Y9 396 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 TRIM22Q8IYM9 498 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 SMYD4Q8IYR2 804 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 STAG2Q8N3U4 1231 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 RASGEF1CQ8N431 466 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 DHRS1Q96LJ7 313 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 NAP1L3Q99457 506 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 INIPQ9NRY2 104 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 KIAA1522Q9P206 1035 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 V9GY48 417 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 ABCB11O95342 1321 aa6.57□□□□□ -1.36
KDM3B-204ENST00000507996 FRMPD2Q68DX3 1309 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-204ENST00000507996 HNRNPRO43390 633 aaKnown RBP6.56□□□□□ -1.36
KDM3B-204ENST00000507996 LYNP07948 512 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 ALOX15P16050 662 aaPredicted RBP6.56□□□□□ -1.36
KDM3B-204ENST00000507996 NAT1P18440 290 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 GUCY1A2P33402 732 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 HOXD12P35452 270 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 MLH1P40692 756 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 HIRAP54198 1017 aaPredicted RBP6.56□□□□□ -1.36
KDM3B-204ENST00000507996 RPL26P61254 145 aaKnown RBP6.56□□□□□ -1.36
KDM3B-204ENST00000507996 TNFAIP1Q13829 316 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 NBPF12Q5TAG4 269 aaPredicted RBP6.56□□□□□ -1.36
KDM3B-204ENST00000507996 DUS1LQ6P1R4 473 aaKnown RBP6.56□□□□□ -1.36
KDM3B-204ENST00000507996 LONP2Q86WA8 852 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 CCNJLQ8IV13 435 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 REM2Q8IYK8 340 aaPredicted RBP6.56□□□□□ -1.36
KDM3B-204ENST00000507996 NME8Q8N427 588 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 FAM117AQ9C073 453 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 GPCPD1Q9NPB8 672 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 NLRC4Q9NPP4 1024 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 MTMR4Q9NYA4 1195 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 ZNF212Q9UDV6 495 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 STXBP5LQ9Y2K9 1186 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 CNTNAP1P78357 1384 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 DDX60LQ5H9U9 1706 aaKnown RBP6.56□□□□□ -1.36
KDM3B-204ENST00000507996 ZNF646O15015 1829 aaPredicted RBP6.56□□□□□ -1.36
KDM3B-204ENST00000507996 TMEM247A6NEH6 219 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 EIF4E1BA6NMX2 242 aaKnown RBP6.56□□□□□ -1.36
KDM3B-204ENST00000507996 TMEM110-MUSTN1A8MSY1 372 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 SPATA31D3P0C874 917 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 CALM1P0DP23 149 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 CALM2P0DP24 149 aa6.56□□□□□ -1.36
KDM3B-204ENST00000507996 CALM3P0DP25 149 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms