RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 GLIPR1L2Q4G1C9 344 aa19.08■□□□□ 0.64
SFXN1-208ENST00000507823 SLFN12LQ6IEE8 588 aa19.08■□□□□ 0.64
SFXN1-208ENST00000507823 PALB2Q86YC2 1186 aa19.08■□□□□ 0.64
SFXN1-208ENST00000507823 ACTRT1Q8TDG2 376 aa19.08■□□□□ 0.64
SFXN1-208ENST00000507823 EPS8L1Q8TE68 723 aa19.08■□□□□ 0.64
SFXN1-208ENST00000507823 KAT5Q92993 513 aa19.08■□□□□ 0.64
SFXN1-208ENST00000507823 CCDC127Q96BQ5 260 aa19.08■□□□□ 0.64
SFXN1-208ENST00000507823 FAM81BQ96LP2 452 aa19.08■□□□□ 0.64
SFXN1-208ENST00000507823 EHD2Q9NZN4 543 aa19.08■□□□□ 0.64
SFXN1-208ENST00000507823 GZMAP12544 262 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 TCF7P36402 384 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-208ENST00000507823 LIG4P49917 911 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 STRN3Q13033 797 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 CCDC62Q6P9F0 684 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 ENOSF1Q7L5Y1 443 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 NT5DC3Q86UY8 548 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 TAS1R2Q8TE23 839 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 GTF3C2Q8WUA4 911 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-208ENST00000507823 SLC20A1Q8WUM9 679 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 HES6Q96HZ4 224 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 MS4A14Q96JA4 679 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 GPR20Q99678 358 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 LRRC1Q9BTT6 524 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 VIPAS39Q9H9C1 493 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 RBM12Q9NTZ6 932 aaKnown RBP19.07■□□□□ 0.64
SFXN1-208ENST00000507823 SMARCAL1Q9NZC9 954 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 ARIH2O95376 493 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 CHRNB2P17787 502 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 GJA5P36382 358 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 GCNT1Q02742 428 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 CELF3Q5SZQ8 465 aaKnown RBP19.07■□□□□ 0.64
SFXN1-208ENST00000507823 PLPPR4Q7Z2D5 763 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 CTNNBL1Q8WYA6 563 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-208ENST00000507823 NT5C1BQ96P26 610 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 POP1Q99575 1024 aaKnown RBP19.07■□□□□ 0.64
SFXN1-208ENST00000507823 TOPORSQ9NS56 1045 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-208ENST00000507823 TAS2R14Q9NYV8 317 aa19.07■□□□□ 0.64
SFXN1-208ENST00000507823 ADGRA2Q96PE1 1338 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 GAS2O43903 313 aaKnown RBP19.06■□□□□ 0.64
SFXN1-208ENST00000507823 CRELD2Q6UXH1 353 aaPredicted RBP19.06■□□□□ 0.64
SFXN1-208ENST00000507823 RASGEF1CQ8N431 466 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 DEPTORQ8TB45 409 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 SLC35G2Q8TBE7 412 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 UBE2Q2Q8WVN8 375 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 BICD1Q96G01 975 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 MMP19Q99542 508 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 FAM213AQ9BRX8 229 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 HAPLN2Q9GZV7 340 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 PACSIN2Q9UNF0 486 aaPredicted RBP19.06■□□□□ 0.64
SFXN1-208ENST00000507823 IGKV6-21A0A0C4DH24 114 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 FAM193AP78312 1265 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 SMC1AQ14683 1233 aaKnown RBP19.06■□□□□ 0.64
SFXN1-208ENST00000507823 CASP8Q14790 479 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 LY6KQ17RY6 165 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 USP38Q8NB14 1042 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 BBXQ8WY36 941 aaPredicted RBP19.06■□□□□ 0.64
SFXN1-208ENST00000507823 ZNF516Q92618 1163 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 TAF4BQ92750 862 aa19.06■□□□□ 0.64
SFXN1-208ENST00000507823 TAF1DQ9H5J8 278 aaPredicted RBP19.06■□□□□ 0.64
SFXN1-208ENST00000507823 GLTPD2A6NH11 291 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 ADCY3O60266 1144 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 TTLL12Q14166 644 aaPredicted RBP19.05■□□□□ 0.64
SFXN1-208ENST00000507823 KCTD2Q14681 263 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 ZACNQ401N2 412 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 RHOT2Q8IXI1 618 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 AGO2Q9UKV8 859 aaKnown RBP19.05■□□□□ 0.64
SFXN1-208ENST00000507823 A0A0B4J269 797 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 K7ERI5 159 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 MTA2O94776 668 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 SGPL1O95470 568 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 LDHAP00338 332 aaKnown RBP19.05■□□□□ 0.64
SFXN1-208ENST00000507823 SNAPC2Q13487 334 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 CAPSQ13938 189 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 CDCA2Q69YH5 1023 aaPredicted RBP19.05■□□□□ 0.64
SFXN1-208ENST00000507823 NOP9Q86U38 636 aaKnown RBP19.05■□□□□ 0.64
SFXN1-208ENST00000507823 EXOC8Q8IYI6 725 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 RPUSD2Q8IZ73 545 aaKnown RBP19.05■□□□□ 0.64
SFXN1-208ENST00000507823 PPM1KQ8N3J5 372 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 AENQ8WTP8 325 aaKnown RBP19.05■□□□□ 0.64
SFXN1-208ENST00000507823 ARHGEF26Q96DR7 871 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 SUGCTQ9HAC7 445 aa19.05■□□□□ 0.64
SFXN1-208ENST00000507823 RNF216Q9NWF9 866 aaPredicted RBP19.05■□□□□ 0.64
SFXN1-208ENST00000507823 DMGDHQ9UI17 866 aaKnown RBP19.05■□□□□ 0.64
SFXN1-208ENST00000507823 TTC7AQ9ULT0 858 aaPredicted RBP19.05■□□□□ 0.64
SFXN1-208ENST00000507823 RTN2O75298 545 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 C4BPAP04003 597 aaKnown RBP19.04■□□□□ 0.64
SFXN1-208ENST00000507823 PGK2P07205 417 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 ERVK-9P63128 1117 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 ZPBP2Q6X784 338 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 PEX26Q7Z412 305 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 SCFD2Q8WU76 684 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 PCDHB18PQ96TA0 734 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 CCDC113Q9H0I3 377 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 THAP2Q9H0W7 228 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 STIM2Q9P246 746 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 ZBTB42B2RXF5 422 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 BUB1BO60566 1050 aaPredicted RBP19.04■□□□□ 0.64
SFXN1-208ENST00000507823 NLRP11P59045 1033 aaKnown RBP19.04■□□□□ 0.64
SFXN1-208ENST00000507823 IER5Q5VY09 327 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 METTL13Q8N6R0 699 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms