RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 RNF151Q2KHN1 245 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 MAP9Q49MG5 647 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 KSR2Q6VAB6 950 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 KRTAP19-1Q8IUB9 90 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 DENND1CQ8IV53 801 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 ZDHHC14Q8IZN3 488 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 CCHCR1Q8TD31 782 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 TIFAQ96CG3 184 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 CLPTM1LQ96KA5 538 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 RPL10LQ96L21 214 aaKnown RBP5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 TOX2Q96NM4 488 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 ARNT2Q9HBZ2 717 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 TDP1Q9NUW8 608 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 TRPS1Q9UHF7 1281 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 PUF60Q9UHX1 559 aaKnown RBP5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 SIK3Q9Y2K2 1263 aa5.19□□□□□ -1.58
HMGB1P28-201ENST00000507778 SLC16A6O15403 523 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 TUSC2O75896 110 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 MAP4K4O95819 1239 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 FTLP02792 175 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 ALDH2P05091 517 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 C8AP07357 584 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 RAC3P60763 192 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 NT5DC1Q5TFE4 455 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 CHST15Q7LFX5 561 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 RSPH3Q86UC2 560 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 CMTM4Q8IZR5 234 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 OR5M3Q8NGP4 307 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 PPP1R35Q8TAP8 253 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 NSUN6Q8TEA1 469 aaKnown RBP5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 RABGGTAQ92696 567 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 TTC17Q96AE7 1141 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 PDCD2LQ9BRP1 358 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 SENP6Q9GZR1 1112 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 FAM204AQ9H8W3 233 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 LANCL2Q9NS86 450 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 SLC52A1Q9NWF4 448 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 NCDNQ9UBB6 729 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 POLHQ9Y253 713 aa5.18□□□□□ -1.58
HMGB1P28-201ENST00000507778 PMS2P1A4D2B8 440 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 PLIN1O60240 522 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 B4GALT3O60512 393 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 UBXN7O94888 489 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 TRIM27P14373 513 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 SYN1P17600 705 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 PTPN7P35236 360 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 CASRP41180 1078 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 ADAM8P78325 824 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 TARDBPQ13148 414 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 FZD5Q13467 585 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 CCDC157Q569K6 752 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 PPP4R4Q6NUP7 873 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 PDZD4Q76G19 769 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 OVCH2Q7RTZ1 564 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 SRGAP1Q7Z6B7 1085 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 PLEKHH3Q7Z736 793 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 LGI4Q8N135 537 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 LILRA3Q8N6C8 439 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 C3orf20Q8ND61 904 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 RGMAQ96B86 450 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 GPHA2Q96T91 129 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 CDC5LQ99459 802 aaKnown RBP5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 CGRRF1Q99675 332 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 SARGQ9BW04 601 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 C12orf65Q9H3J6 166 aaKnown RBP5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 LDAHQ9H6V9 325 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 TMEM140Q9NV12 185 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 USP40Q9NVE5 1235 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 STXBP5LQ9Y2K9 1186 aa5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 MYBBP1AQ9BQG0 1328 aaKnown RBP5.17□□□□□ -1.58
HMGB1P28-201ENST00000507778 ADCY6O43306 1168 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 SLC26A4O43511 780 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 B3GALT2O43825 422 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 SASH1O94885 1247 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 IL2RBP14784 551 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 CFPP27918 469 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 HTR1BP28222 390 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 IL12RB1P42701 662 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 MAP2K6P52564 334 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 HK3P52790 923 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 USP14P54578 494 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 NPEPPSP55786 919 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 PPP2CBP62714 309 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 PPP2CAP67775 309 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 PURAQ00577 322 aaKnown RBP5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 RAB39AQ14964 217 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 LLGL1Q15334 1064 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 KHDC1Q4VXA5 237 aaKnown RBP5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 GADL1Q6ZQY3 521 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 ARHGEF18Q6ZSZ5 1173 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 DAAM2Q86T65 1068 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 SP8Q8IXZ3 490 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 LRRC56Q8IYG6 542 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 TRMT2AQ8IZ69 625 aaKnown RBP5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 REPS2Q8NFH8 660 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 KLHDC4Q8TBB5 520 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 ZSCAN18Q8TBC5 510 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 MDM1Q8TC05 714 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 STON2Q8WXE9 905 aa5.16□□□□□ -1.58
HMGB1P28-201ENST00000507778 CFHR4Q92496 578 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms