RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 PNPLA4P41247 253 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 CALCOCO2Q13137 446 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 DPCR1Q3MIW9 517 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 KAZNQ674X7 775 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 MPZL3Q6UWV2 235 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 ZNF410Q86VK4 478 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 CCDC25Q86WR0 208 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 FAM133AQ8N9E0 248 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 C12orf42Q96LP6 360 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 NDST4Q9H3R1 872 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 RSAD1Q9HA92 442 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 DNAJC12Q9UKB3 198 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 CYTH3O43739 400 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 PRPSAP2O60256 369 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 EFCAB14O75071 495 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 CTDNEP1O95476 244 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 SLC4A1P02730 911 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 MMP3P08254 477 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 RTP1P59025 263 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 RFX6Q8HWS3 928 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 KIAA1524Q8TCG1 905 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 RSAD2Q8WXG1 361 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 HAUS1Q96CS2 278 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 RUSC1Q9BVN2 902 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 FTHL17Q9BXU8 183 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 DPP3Q9NY33 737 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 MOSPD1Q9UJG1 213 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 TBX20Q9UMR3 447 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 FAM50BQ9Y247 325 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 IGF2BP3O00425 579 aaKnown RBP eCLIP10.12□□□□□ -0.79
NEK1-203ENST00000507142 AKAP5P24588 427 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 EPHB1P54762 984 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 KCNB1Q14721 858 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 SNRNP35Q16560 246 aaKnown RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 RINT1Q6NUQ1 792 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 DDX53Q86TM3 631 aaKnown RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 TMEM35BQ8NCS4 154 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 PPP1R14CQ8TAE6 165 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 SNTG2Q9NY99 539 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 AMFRQ9UKV5 643 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 PPME1Q9Y570 386 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 MCM3P25205 808 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 CCND3P30281 292 aaPredicted RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 CD52P31358 61 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 HS1BP3Q53T59 392 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 SH3D19Q5HYK7 790 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 CCDC91Q7Z6B0 441 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 KCTD17Q8N5Z5 321 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 FBXL13Q8NEE6 735 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 CEP63Q96MT8 703 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 CELF4Q9BZC1 486 aaKnown RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 ZCCHC17Q9NP64 241 aaKnown RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 MYMKA6NI61 221 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 MOCS3O95396 460 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 PRR29P0C7W0 189 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 ACRP10323 421 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 PRCPP42785 496 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 NDUFV1P49821 464 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 FPGSQ05932 587 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 NCOA4Q13772 614 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 MAP9Q49MG5 647 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 PPTC7Q8NI37 304 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 PPANQ9NQ55 473 aaKnown RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 GABRQQ9UN88 632 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 BZW2Q9Y6E2 419 aaKnown RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 UBE4BO95155 1302 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 NDC80O14777 642 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 EXTL3O43909 919 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 CEP104O60308 925 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 TLE2Q04725 743 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 SDE2Q6IQ49 451 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 ZNF280DQ6N043 979 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 IL31RAQ8NI17 732 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 DDX50Q9BQ39 737 aaKnown RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 TRIM9Q9C026 710 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 DNAJC18Q9H819 358 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 HPCAL4Q9UM19 191 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 FNDC3AQ9Y2H6 1198 aaKnown RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 ITGB3P05106 788 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 MYL4P12829 197 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 NPTX2P47972 431 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 MESDQ14696 234 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 AMHR2Q16671 573 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 FAM171A1Q5VUB5 890 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 SYT2Q8N9I0 419 aaPredicted RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 SLITRK1Q96PX8 696 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 CYP4F11Q9HBI6 524 aa10.12□□□□□ -0.79
NEK1-203ENST00000507142 DIS3Q9Y2L1 958 aaKnown RBP10.12□□□□□ -0.79
NEK1-203ENST00000507142 PDXKO00764 312 aa10.11□□□□□ -0.79
NEK1-203ENST00000507142 OGTO15294 1046 aa10.11□□□□□ -0.79
NEK1-203ENST00000507142 IFNB1P01574 187 aa10.11□□□□□ -0.79
NEK1-203ENST00000507142 SMPD1P17405 629 aa10.11□□□□□ -0.79
NEK1-203ENST00000507142 EPHB3P54753 998 aa10.11□□□□□ -0.79
NEK1-203ENST00000507142 NME3Q13232 169 aa10.11□□□□□ -0.79
NEK1-203ENST00000507142 PKN1Q16512 942 aa10.11□□□□□ -0.79
NEK1-203ENST00000507142 CCDC60Q8IWA6 550 aaPredicted RBP10.11□□□□□ -0.79
NEK1-203ENST00000507142 HPDLQ96IR7 371 aa10.11□□□□□ -0.79
NEK1-203ENST00000507142 IQCGQ9H095 443 aaKnown RBP10.11□□□□□ -0.79
NEK1-203ENST00000507142 MRPL47Q9HD33 250 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms