RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 MAGEC3Q8TD91 643 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 EPS8L3Q8TE67 593 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 CENPTQ96BT3 561 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 MEGF10Q96KG7 1140 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 SPAG5Q96R06 1193 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 LRRC1Q9BTT6 524 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 NSRP1Q9H0G5 558 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 HDAC6Q9UBN7 1215 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 STX8Q9UNK0 236 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 PHLPP1O60346 1717 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 A0A1B0GUL6 1792 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 MYH1P12882 1939 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 CACNA1SQ13698 1873 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 ABCA3Q99758 1704 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 C10orf71Q711Q0 1435 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 PNMA6FA0A0J9YX94 578 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 GMNCA6NCL1 334 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 TRIM49BA6NDI0 452 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 LRRC53A6NM62 1247 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 CCDC169A6NNP5 214 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 UBE2Q2LH0YL09 131 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 AGPSO00116 658 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 PODXLO00592 558 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 SLC16A3O15427 465 aaKnown RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 SRGAP2O75044 1071 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 HEXIM1O94992 359 aaKnown RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 MOCS3O95396 460 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 FOSP01100 380 aaPredicted RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 ESRRAP11474 423 aaPredicted RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 EZRP15311 586 aaKnown RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 GAP43P17677 238 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 MUTP22033 750 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 CASP1P29466 404 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 CDC25AP30304 524 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 LSP1P33241 339 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 HSPA9P38646 679 aaKnown RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 TXKP42681 527 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 ARL4DP49703 201 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 DYNLL1P63167 89 aaKnown RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 GUCY2DQ02846 1103 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 C19orf57Q0VDD7 668 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 HLTFQ14527 1009 aaKnown RBP eCLIP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 DUOXA2Q1HG44 320 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 NKAPLQ5M9Q1 402 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 FAM26FQ5R3K3 315 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 HYIQ5T013 277 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 FAM83BQ5T0W9 1011 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 GKAP1Q5VSY0 366 aaPredicted RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 RCSD1Q6JBY9 416 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 C16orf86Q6ZW13 317 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 ACAD11Q709F0 780 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 TAOK1Q7L7X3 1001 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 CNPY4Q8N129 248 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 GBP7Q8N8V2 638 aaPredicted RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 PRPF38AQ8NAV1 312 aaKnown RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 GIMAP7Q8NHV1 300 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 CCHCR1Q8TD31 782 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 TBCKQ8TEA7 893 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 UBASH3BQ8TF42 649 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 IFT81Q8WYA0 676 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 TP53INP1Q96A56 240 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 CCDC43Q96MW1 224 aaKnown RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 ASB16Q96NS5 453 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 MTMR9Q96QG7 549 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 EYA3Q99504 573 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 NCAPGQ9BPX3 1015 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 TMEM47Q9BQJ4 181 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 MOV10L1Q9BXT6 1211 aaKnown RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 RIOX1Q9H6W3 641 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 SUGCTQ9HAC7 445 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 EPB41L5Q9HCM4 733 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 FAM207AQ9NSI2 230 aaPredicted RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 PANK4Q9NVE7 773 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 ARHGAP20Q9P2F6 1191 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 SUCLA2Q9P2R7 463 aaPredicted RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 MTRF1LQ9UGC7 380 aaKnown RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 ARMCX3Q9UH62 379 aaPredicted RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 HDAC9Q9UKV0 1011 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 AMFRQ9UKV5 643 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 TTC7AQ9ULT0 858 aaPredicted RBP6.37□□□□□ -1.39
CLDND1-213ENST00000506927 PCDHA12Q9UN75 941 aa6.37□□□□□ -1.39
CLDND1-213ENST00000506927 TNRC6CQ9HCJ0 1690 aaKnown RBP6.36□□□□□ -1.39
CLDND1-213ENST00000506927 PFASO15067 1338 aa6.36□□□□□ -1.39
CLDND1-213ENST00000506927 UBE4BO95155 1302 aa6.36□□□□□ -1.39
CLDND1-213ENST00000506927 FLT1P17948 1338 aa6.36□□□□□ -1.39
CLDND1-213ENST00000506927 CNTNAP4Q9C0A0 1308 aa6.36□□□□□ -1.39
CLDND1-213ENST00000506927 hCG_1642624A0A1W2PR95 340 aa6.36□□□□□ -1.39
CLDND1-213ENST00000506927 MIF4GDA9UHW6 222 aaKnown RBP6.36□□□□□ -1.39
CLDND1-213ENST00000506927 PDXKO00764 312 aa6.36□□□□□ -1.39
CLDND1-213ENST00000506927 AFPP02771 609 aaKnown RBP6.36□□□□□ -1.39
CLDND1-213ENST00000506927 H2AFZP0C0S5 128 aa6.36□□□□□ -1.39
CLDND1-213ENST00000506927 GHRP10912 638 aa6.36□□□□□ -1.39
CLDND1-213ENST00000506927 XRCC5P13010 732 aaKnown RBP6.36□□□□□ -1.39
CLDND1-213ENST00000506927 CTNNA1P35221 906 aaKnown RBP6.36□□□□□ -1.39
CLDND1-213ENST00000506927 MAP2K2P36507 400 aa6.36□□□□□ -1.39
CLDND1-213ENST00000506927 PRKCIP41743 596 aa6.36□□□□□ -1.39
CLDND1-213ENST00000506927 MATR3P43243 847 aaKnown RBP eCLIP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms