RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 HCFC2Q9Y5Z7 792 aa10.03□□□□□ -0.8
PDLIM5-209ENST00000506632 TDRD15B5MCY1 1934 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 ACKR2O00590 384 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 N4BP3O15049 544 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 GPR37L1O60883 481 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 LILRB3O75022 631 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 NPTXRO95502 500 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 CXCL14O95715 111 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 ALDH2P05091 517 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 PRKCBP05771 671 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 SRGAP2BP0DMP2 458 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 HOXB8P17481 243 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 MAPK7Q13164 816 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 GIT2Q14161 759 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 BMS1Q14692 1282 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 CBX2Q14781 532 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 PTPN14Q15678 1187 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 MAPK6Q16659 721 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 LARP1BQ659C4 914 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 C1orf186Q6ZWK4 172 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 HACE1Q8IYU2 909 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 KCTD17Q8N5Z5 321 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 AUTS2Q8WXX7 1259 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 PNMA5Q96PV4 448 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 FAM193BQ96PV7 902 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 BACH2Q9BYV9 841 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 TRIM6Q9C030 488 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 POLD4Q9HCU8 107 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 DNM3Q9UQ16 869 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 FAN1Q9Y2M0 1017 aa10.02□□□□□ -0.81
PDLIM5-209ENST00000506632 LOC730098B7Z3J9 87 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 DCXO43602 365 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 SOD2P04179 222 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 AKAP5P24588 427 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 EFNA5P52803 228 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 GRIK3Q13003 919 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 PRPF4BQ13523 1007 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 NT5DC1Q5TFE4 455 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 EEF1DP3Q658K8 133 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 RINT1Q6NUQ1 792 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 LLGL2Q6P1M3 1020 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 BRAPQ7Z569 592 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 DEPTORQ8TB45 409 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 SLC22A17Q8WUG5 538 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 CASP10Q92851 521 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 IFT74Q96LB3 600 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 LRFN3Q9BTN0 628 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 KIFC3Q9BVG8 833 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 RUSC1Q9BVN2 902 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 HERC2P3Q9BVR0 1158 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 APOL6Q9BWW8 343 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 PHF7Q9BWX1 381 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 ARHGAP28Q9P2N2 729 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 USP20Q9Y2K6 914 aa10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 PRG3Q9Y2Y8 225 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-209ENST00000506632 VWA3AA6NCI4 1184 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 F8W810 466 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 PTGESO14684 152 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 SLC26A4O43511 780 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 HIP1RO75146 1068 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 PYGBP11216 843 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 ALADP13716 330 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 COL9A1P20849 921 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 GUCY2CP25092 1073 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 OR1G1P47890 313 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 NPTX2P47972 431 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 NAB2Q15742 525 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 TMEM119Q4V9L6 283 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 HERC4Q5GLZ8 1057 aaPredicted RBP10□□□□□ -0.81
PDLIM5-209ENST00000506632 TMEM31Q5JXX7 168 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 ATF7IP2Q5U623 682 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 TAS1R3Q7RTX0 852 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 TAS1R1Q7RTX1 841 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 RNF135Q8IUD6 432 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 AK8Q96MA6 479 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 DRC1Q96MC2 740 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 KLHL5Q96PQ7 755 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 NTPCRQ9BSD7 190 aaKnown RBP10□□□□□ -0.81
PDLIM5-209ENST00000506632 TIPINQ9BVW5 301 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 NT5C3AQ9H0P0 336 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 TMEM134Q9H6X4 195 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 C17orf75Q9HAS0 396 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 CHST7Q9NS84 486 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 DZANK1Q9NVP4 752 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 KLK14Q9P0G3 267 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 PARP2Q9UGN5 583 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 PHLPP2Q6ZVD8 1323 aa10□□□□□ -0.81
PDLIM5-209ENST00000506632 K7ERI5 159 aa9.99□□□□□ -0.81
PDLIM5-209ENST00000506632 ABLIM1O14639 778 aa9.99□□□□□ -0.81
PDLIM5-209ENST00000506632 RECQL4O94761 1208 aa9.99□□□□□ -0.81
PDLIM5-209ENST00000506632 BMP15O95972 392 aa9.99□□□□□ -0.81
PDLIM5-209ENST00000506632 CNPP09543 421 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-209ENST00000506632 EPCAMP16422 314 aa9.99□□□□□ -0.81
PDLIM5-209ENST00000506632 CLCN4P51793 760 aa9.99□□□□□ -0.81
PDLIM5-209ENST00000506632 SLC12A3P55017 1021 aa9.99□□□□□ -0.81
PDLIM5-209ENST00000506632 PEX3P56589 373 aa9.99□□□□□ -0.81
PDLIM5-209ENST00000506632 DSG1Q02413 1049 aa9.99□□□□□ -0.81
PDLIM5-209ENST00000506632 ITIH3Q06033 890 aa9.99□□□□□ -0.81
PDLIM5-209ENST00000506632 DMP1Q13316 513 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms