RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SLC17A8Q8NDX2 589 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 ARHGEF26Q96DR7 871 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 NRBP2Q9NSY0 501 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 ZHX1Q9UKY1 873 aaPredicted RBP13.2□□□□□ -0.3
LIN54-206ENST00000506560 PLXNB2O15031 1838 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 CYP26A1O43174 497 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 TNFSF9P41273 254 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 ADCYAP1R1P41586 468 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 NAMPTP43490 491 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 CLCN3P51790 818 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 VSNL1P62760 191 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 IGBP1P78318 339 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 FAM160B1Q5W0V3 765 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 KRT39Q6A163 491 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 ZBTB33Q86T24 672 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 SLC47A2Q86VL8 602 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 HELQQ8TDG4 1101 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 ALS2CR12Q96Q35 445 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 BZW2Q9Y6E2 419 aaKnown RBP13.2□□□□□ -0.3
LIN54-206ENST00000506560 MAPK13O15264 365 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.38e-6■□□□□ 9.7
LIN54-206ENST00000506560 NOP2P46087 812 aaKnown RBP13.2□□□□□ -0.3
LIN54-206ENST00000506560 STRN3Q13033 797 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 ZNF792Q3KQV3 632 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 CST9Q5W186 159 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 CAGE1Q8TC20 777 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 PCDHB18PQ96TA0 734 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 TMEM8AQ9HCN3 771 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 NMRK2Q9NPI5 230 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 AGO2Q9UKV8 859 aaKnown RBP13.2□□□□□ -0.3
LIN54-206ENST00000506560 PCDHGC5Q9Y5F6 944 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 ADCY6O43306 1168 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 LGR5O75473 907 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 SASH3O75995 380 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 ZNF286BP0CG31 522 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 CETPP11597 493 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 GARTP22102 1010 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 SNRPFP62306 86 aaKnown RBP13.19□□□□□ -0.3
LIN54-206ENST00000506560 ARHGAP1Q07960 439 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 PRPF4BQ13523 1007 aaKnown RBP13.19□□□□□ -0.3
LIN54-206ENST00000506560 BMS1Q14692 1282 aaKnown RBP13.19□□□□□ -0.3
LIN54-206ENST00000506560 NOP9Q86U38 636 aaKnown RBP13.19□□□□□ -0.3
LIN54-206ENST00000506560 MORC4Q8TE76 937 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
LIN54-206ENST00000506560 PLEKHA4Q9H4M7 779 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 ST7Q9NRC1 585 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 TRPC6Q9Y210 931 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 GRIN3BO60391 1043 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 IRX5P78411 483 aaPredicted RBP13.19□□□□□ -0.3
LIN54-206ENST00000506560 DMTNQ08495 405 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 LAMTOR4Q0VGL1 99 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 KIF22Q14807 665 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 TDRD10Q5VZ19 366 aaKnown RBP13.19□□□□□ -0.3
LIN54-206ENST00000506560 CC2D1AQ6P1N0 951 aaPredicted RBP13.19□□□□□ -0.3
LIN54-206ENST00000506560 RHPN2Q8IUC4 686 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 RNF10Q8N5U6 811 aaKnown RBP13.19□□□□□ -0.3
LIN54-206ENST00000506560 ATP8B4Q8TF62 1192 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 THAP2Q9H0W7 228 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 RAB20Q9NX57 234 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 PNMA3Q9UL41 463 aa13.19□□□□□ -0.3
LIN54-206ENST00000506560 ZC3H4Q9UPT8 1303 aaKnown RBP13.18□□□□□ -0.3
LIN54-206ENST00000506560 SIP14410 1827 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 ZNF233A6NK53 670 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 B4GALT5O43286 388 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 ADCY3O60266 1144 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 N4BP1O75113 896 aaKnown RBP13.18□□□□□ -0.3
LIN54-206ENST00000506560 ZRANB2O95218 330 aaKnown RBP eCLIP13.18□□□□□ -0.3
LIN54-206ENST00000506560 SNAI1O95863 264 aaPredicted RBP13.18□□□□□ -0.3
LIN54-206ENST00000506560 H2AFZP0C0S5 128 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 CHRNB2P17787 502 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 GTF2A2P52657 109 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 TUBB2AQ13885 445 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 SPRYD7Q5W111 196 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 H2AFVQ71UI9 128 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 METTL13Q8N6R0 699 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 FBXL13Q8NEE6 735 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 OR5B17Q8NGF7 314 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 HDAC7Q8WUI4 952 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 AFG1LQ8WV93 481 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 BBXQ8WY36 941 aaPredicted RBP13.18□□□□□ -0.3
LIN54-206ENST00000506560 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 MSTO1Q9BUK6 570 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 TUBB2BQ9BVA1 445 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 MINDY3Q9H8M7 445 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 COQ4Q9Y3A0 265 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 P4HA2O15460 535 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 ATMINO43313 823 aaPredicted RBP13.18□□□□□ -0.3
LIN54-206ENST00000506560 EXTL3O43909 919 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 TNNI1P19237 187 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 RFC5P40937 340 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 CETN1Q12798 172 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 TTLL4Q14679 1199 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 GPR142Q7Z601 462 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 GSPT2Q8IYD1 628 aaKnown RBP13.18□□□□□ -0.3
LIN54-206ENST00000506560 RPUSD2Q8IZ73 545 aaKnown RBP13.18□□□□□ -0.3
LIN54-206ENST00000506560 CEP120Q8N960 986 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 LRRC57Q8N9N7 239 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 SHCBP1Q8NEM2 672 aa13.18□□□□□ -0.3
LIN54-206ENST00000506560 TMC2Q8TDI7 906 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms