RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 FBXO18Q8NFZ0 1043 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 PDCD2LQ9BRP1 358 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 LDAHQ9H6V9 325 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 TDP1Q9NUW8 608 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 SLC52A1Q9NWF4 448 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 GPRC5DQ9NZD1 345 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 TRPS1Q9UHF7 1281 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 SIK3Q9Y2K2 1263 aa7.56□□□□□ -1.2
HERC4-213ENST00000506515 CFAP20Q9Y6A4 193 aaKnown RBP7.56□□□□□ -1.2
HERC4-213ENST00000506515 ALDH2P05091 517 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 RPLP2P05387 115 aaKnown RBP7.55□□□□□ -1.2
HERC4-213ENST00000506515 JUNP05412 331 aaKnown RBP7.55□□□□□ -1.2
HERC4-213ENST00000506515 SYN1P17600 705 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 DSC2Q02487 901 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 HGFACQ04756 655 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 HLTFQ14527 1009 aaKnown RBP eCLIP7.55□□□□□ -1.2
HERC4-213ENST00000506515 LLGL1Q15334 1064 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 MAP9Q49MG5 647 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 NT5DC1Q5TFE4 455 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 CCSAPQ6IQ19 270 aaPredicted RBP7.55□□□□□ -1.2
HERC4-213ENST00000506515 TTC7BQ86TV6 843 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 DENND1CQ8IV53 801 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 REPS2Q8NFH8 660 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 OR7D4Q8NG98 312 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 MANSC1Q9H8J5 431 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 BCO1Q9HAY6 547 aa7.55□□□□□ -1.2
HERC4-213ENST00000506515 NOBOXO60393 691 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 B4GALT3O60512 393 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 FTLP02792 175 aaPredicted RBP7.54□□□□□ -1.2
HERC4-213ENST00000506515 MYL1P05976 194 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 C8AP07357 584 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 GYPEP15421 78 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 PTPN7P35236 360 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 SREBF1P36956 1147 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 CASRP41180 1078 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 CCDC157Q569K6 752 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 BORAQ6PGQ7 559 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 OVCH2Q7RTZ1 564 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 RSPH3Q86UC2 560 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 LILRA3Q8N6C8 439 aaPredicted RBP7.54□□□□□ -1.2
HERC4-213ENST00000506515 OR5M3Q8NGP4 307 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 STON2Q8WXE9 905 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 CLPTM1LQ96KA5 538 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 FAM193BQ96PV7 902 aaPredicted RBP7.54□□□□□ -1.2
HERC4-213ENST00000506515 SENP6Q9GZR1 1112 aaPredicted RBP7.54□□□□□ -1.2
HERC4-213ENST00000506515 C12orf65Q9H3J6 166 aaKnown RBP7.54□□□□□ -1.2
HERC4-213ENST00000506515 ARNT2Q9HBZ2 717 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 JADE2Q9NQC1 790 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.54□□□□□ -1.2
HERC4-213ENST00000506515 PUF60Q9UHX1 559 aaKnown RBP7.54□□□□□ -1.2
HERC4-213ENST00000506515 SLC4A7Q9Y6M7 1214 aa7.54□□□□□ -1.2
HERC4-213ENST00000506515 WDR62O43379 1518 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 LRRC14BA6NHZ5 514 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 A6NNZ2 444 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 H3BML4 177 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 MTSS1O43312 755 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 UBXN7O94888 489 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 CRHR1P34998 444 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 CDC42EP1Q00587 391 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 TARDBPQ13148 414 aaKnown RBP eCLIP7.53□□□□□ -1.2
HERC4-213ENST00000506515 NFYCQ13952 458 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 GAGE13Q4V321 117 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 PPP4R4Q6NUP7 873 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 LRRC56Q8IYG6 542 aaPredicted RBP7.53□□□□□ -1.2
HERC4-213ENST00000506515 SYT8Q8NBV8 401 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 MDM1Q8TC05 714 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 RGMAQ96B86 450 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 TMX3Q96JJ7 454 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 GPHA2Q96T91 129 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 CGRRF1Q99675 332 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 KMT5AQ9NQR1 393 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 LANCL2Q9NS86 450 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 KIF21AQ7Z4S6 1674 aa7.53□□□□□ -1.2
HERC4-213ENST00000506515 MYBBP1AQ9BQG0 1328 aaKnown RBP7.52□□□□□ -1.2
HERC4-213ENST00000506515 CEP164Q9UPV0 1460 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 NRP1O14786 923 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 SGTAO43765 313 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 GASTP01350 101 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 HTR1BP28222 390 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 MAP2K6P52564 334 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 RAC3P60763 192 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 ADAM8P78325 824 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 GALEQ14376 348 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 CYB5RLQ6IPT4 315 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 CMTM4Q8IZR5 234 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 ZGPATQ8N5A5 531 aaKnown RBP7.52□□□□□ -1.21
HERC4-213ENST00000506515 NSUN6Q8TEA1 469 aaKnown RBP7.52□□□□□ -1.21
HERC4-213ENST00000506515 CFHR4Q92496 578 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 TOX2Q96NM4 488 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 CDC5LQ99459 802 aaKnown RBP7.52□□□□□ -1.21
HERC4-213ENST00000506515 PCGF6Q9BYE7 350 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 FAM204AQ9H8W3 233 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 MAN1C1Q9NR34 630 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 USP40Q9NVE5 1235 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 AJAP1Q9UKB5 411 aaPredicted RBP7.52□□□□□ -1.21
HERC4-213ENST00000506515 FAM50BQ9Y247 325 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 NR2E3Q9Y5X4 410 aa7.52□□□□□ -1.21
HERC4-213ENST00000506515 SLC26A4O43511 780 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 B3GALT2O43825 422 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 TUSC2O75896 110 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms