RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 GPR39O43194 453 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 MYO1BO43795 1136 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 ZRANB2O95218 330 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCLT1-207ENST00000506233 CALML3P27482 149 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 GRIA4P48058 902 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 NAPAP54920 295 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 ICA1Q05084 483 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 MYBPC2Q14324 1141 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 NOL9Q5SY16 702 aaKnown RBP6.52□□□□□ -1.37
SCLT1-207ENST00000506233 SYDE2Q5VT97 1194 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 KRT25Q7Z3Z0 450 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 REC114Q7Z4M0 266 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 MB21D1Q8N884 522 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 SYT2Q8N9I0 419 aaPredicted RBP6.52□□□□□ -1.37
SCLT1-207ENST00000506233 NELFBQ8WX92 580 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 CNTNAP3BQ96NU0 1288 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 PANX2Q96RD6 677 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 TCF12Q99081 682 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 PCYT2Q99447 389 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 LRRC3Q9BY71 257 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 CNTNAP3Q9BZ76 1288 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 WDR11Q9BZH6 1224 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 KATNBL1Q9H079 304 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 ZHX3Q9H4I2 956 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 TISP43B9A030 160 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 TGFBR3LH3BV60 316 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 TCEA3O75764 348 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 PTPRAP18433 802 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 GMPSP49915 693 aaPredicted RBP6.51□□□□□ -1.37
SCLT1-207ENST00000506233 ADCY7P51828 1080 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 TMPRSS15P98073 1019 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 TMEM132BQ14DG7 1078 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 CCDC178Q5BJE1 867 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 SPECC1LQ69YQ0 1117 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 TMC6Q7Z403 805 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 CEP57L1Q8IYX8 460 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 PJA1Q8NG27 643 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 ZKSCAN4Q969J2 545 aaPredicted RBP6.51□□□□□ -1.37
SCLT1-207ENST00000506233 ERGIC2Q96RQ1 377 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 SARGQ9BW04 601 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 SPATA9Q9BWV2 254 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 KIAA1683Q9H0B3 1180 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 CRTAC1Q9NQ79 661 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 RGL1Q9NZL6 768 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 DDX25Q9UHL0 483 aaKnown RBP6.51□□□□□ -1.37
SCLT1-207ENST00000506233 MAPRE3Q9UPY8 281 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 MAP4K5Q9Y4K4 846 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 IGKV6D-21A0A0A0MT36 114 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 SOWAHBA6NEL2 793 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 LGALS16A8MUM7 142 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 ZNF862O60290 1169 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 SASH3O75995 380 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 VCAM1P19320 739 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 RPA1P27694 616 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 ADSSP30520 456 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 COPB1P53618 953 aaKnown RBP6.51□□□□□ -1.37
SCLT1-207ENST00000506233 COASYQ13057 564 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 GRM3Q14832 879 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 TREML2Q5T2D2 321 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 GPAT2Q6NUI2 795 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 CYP2U1Q7Z449 544 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 TRIM59Q8IWR1 403 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 ANKRD42Q8N9B4 389 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 HHIPQ96QV1 700 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 CAPN11Q9UMQ6 739 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 PCDHA1Q9Y5I3 950 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 ABLIM1O14639 778 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 ATP2A1O14983 1001 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 MYBP10242 640 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 ACRP10323 421 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 GNAQP50148 359 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 UBASH3AP57075 661 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 FAAP100Q0VG06 881 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 KCTD2Q14681 263 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 UNC13DQ70J99 1090 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 IRF2BP2Q7Z5L9 587 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 KSR1Q8IVT5 923 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 CACTIN-AS1Q8N1I8 211 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 TMEM130Q8N3G9 435 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 GATAD2BQ8WXI9 593 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 SMARCE1Q969G3 411 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 SUSD3Q96L08 255 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 DESI2Q9BSY9 194 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 TRIM5Q9C035 493 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 MUC3BQ9H195 1237 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 ANKZF1Q9H8Y5 726 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 PSTPIP2Q9H939 334 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 KIF3AQ9Y496 699 aa6.51□□□□□ -1.37
SCLT1-207ENST00000506233 COL4A6Q14031 1691 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 PDE2AO00408 941 aaPredicted RBP6.5□□□□□ -1.37
SCLT1-207ENST00000506233 KCNA2P16389 499 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 EPS15P42566 896 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 TXKP42681 527 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 DTHD1Q6ZMT9 781 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 SUGP1Q8IWZ8 645 aaKnown RBP6.5□□□□□ -1.37
SCLT1-207ENST00000506233 SLC30A5Q8TAD4 765 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 BSNDQ8WZ55 320 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 REEP2Q9BRK0 252 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 SDF4Q9BRK5 362 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 THAP9Q9H5L6 903 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms