RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 MFSD1Q9H3U5 465 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 NXF3Q9H4D5 531 aaKnown RBP12.63□□□□□ -0.39
SIL1-208ENST00000505945 KLK14Q9P0G3 267 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 SSX2IPQ9Y2D8 614 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 GIT1Q9Y2X7 761 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 RIF1Q5UIP0 2472 aaKnown RBP12.62□□□□□ -0.39
SIL1-208ENST00000505945 C2orf16Q68DN1 1984 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 POTEMA6NI47 508 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 USO1O60763 962 aaKnown RBP12.62□□□□□ -0.39
SIL1-208ENST00000505945 NR1I2O75469 434 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 NPTXRO95502 500 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 GLUD1P00367 558 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 ATP2B1P20020 1258 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 GLUD2P49448 558 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 NUBP1P53384 320 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 TDGQ13569 410 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
SIL1-208ENST00000505945 PALB2Q86YC2 1186 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 HACE1Q8IYU2 909 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 FLCNQ8NFG4 579 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 NFKBIZQ9BYH8 718 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 GPR62Q9BZJ7 368 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 POLR3FQ9H1D9 316 aaPredicted RBP12.62□□□□□ -0.39
SIL1-208ENST00000505945 TMEM60Q9H2L4 133 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 KCNK12Q9HB15 430 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 RXFP1Q9HBX9 757 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 GPRC5CQ9NQ84 441 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 CHST7Q9NS84 486 aa12.62□□□□□ -0.39
SIL1-208ENST00000505945 DENND4AQ7Z401 1863 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 TDRD15B5MCY1 1934 aaKnown RBP12.61□□□□□ -0.39
SIL1-208ENST00000505945 A0A1B0GUA9 196 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 ST18O60284 1047 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 GFRA3O60609 400 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 N4BP1O75113 896 aaKnown RBP12.61□□□□□ -0.39
SIL1-208ENST00000505945 RFPL2O75678 378 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 SPATA31C1P0DKV0 1188 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 XRCC6P12956 609 aaKnown RBP eCLIP12.61□□□□□ -0.39
SIL1-208ENST00000505945 NEK4P51957 841 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 DSG1Q02413 1049 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 TRIM29Q14134 588 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 SLC27A1Q6PCB7 646 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 CATSPER3Q86XQ3 398 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 GLYCTKQ8IVS8 523 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 CMASQ8NFW8 434 aaPredicted RBP12.61□□□□□ -0.39
SIL1-208ENST00000505945 CACNG4Q9UBN1 327 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 PARP2Q9UGN5 583 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 PLXNA3P51805 1871 aa12.61□□□□□ -0.39
SIL1-208ENST00000505945 LRRIQ4A6NIV6 560 aa12.6□□□□□ -0.39
SIL1-208ENST00000505945 NPR3P17342 541 aa12.6□□□□□ -0.39
SIL1-208ENST00000505945 RPL17P18621 184 aaKnown RBP12.6□□□□□ -0.39
SIL1-208ENST00000505945 GBP2P32456 591 aaPredicted RBP12.6□□□□□ -0.39
SIL1-208ENST00000505945 MCM7P33993 719 aa12.6□□□□□ -0.39
SIL1-208ENST00000505945 CLCN5P51795 746 aa12.6□□□□□ -0.39
SIL1-208ENST00000505945 GUCY1B3Q02153 619 aa12.6□□□□□ -0.39
SIL1-208ENST00000505945 FUT10Q6P4F1 479 aa12.6□□□□□ -0.39
SIL1-208ENST00000505945 RSAD2Q8WXG1 361 aa12.6□□□□□ -0.39
SIL1-208ENST00000505945 SMG7Q92540 1137 aaKnown RBP12.6□□□□□ -0.39
SIL1-208ENST00000505945 PAAF1Q9BRP4 392 aa12.6□□□□□ -0.39
SIL1-208ENST00000505945 WDR6Q9NNW5 1121 aaKnown RBP12.6□□□□□ -0.39
SIL1-208ENST00000505945 DPP7Q9UHL4 492 aa12.6□□□□□ -0.39
SIL1-208ENST00000505945 TTLL13PA6NNM8 815 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 TGM5O43548 720 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 PI15O43692 258 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 NARSO43776 548 aaKnown RBP12.59□□□□□ -0.39
SIL1-208ENST00000505945 MED24O75448 989 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 TADA2AO75478 443 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 NEFLP07196 543 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 ST3GAL1Q11201 340 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 GRIK3Q13003 919 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 USP41Q3LFD5 358 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 CWF19L1Q69YN2 538 aaKnown RBP12.59□□□□□ -0.39
SIL1-208ENST00000505945 LILRA6Q6PI73 481 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 ELMSAN1Q6PJG2 1045 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 CYP26C1Q6V0L0 522 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 RIN2Q8WYP3 895 aaPredicted RBP12.59□□□□□ -0.39
SIL1-208ENST00000505945 ZNF707Q96C28 371 aaPredicted RBP12.59□□□□□ -0.39
SIL1-208ENST00000505945 MYADMQ96S97 322 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 NT5C3AQ9H0P0 336 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 FZD8Q9H461 694 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 PIDD1Q9HB75 910 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 TUFT1Q9NNX1 390 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 IGSF9Q9P2J2 1179 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 ADAM28Q9UKQ2 775 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 FBXL21Q9UKT6 434 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 DUSP12Q9UNI6 340 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 USP20Q9Y2K6 914 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 CLUHO75153 1309 aa12.59□□□□□ -0.39
SIL1-208ENST00000505945 SPTBN4Q9H254 2564 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 PROB1E7EW31 1015 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 CFHP08603 1231 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 ZNF174Q15697 407 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 POTEGQ6S5H5 508 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 PRSS55Q6UWB4 352 aaPredicted RBP12.58□□□□□ -0.4
SIL1-208ENST00000505945 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 SIX5Q8N196 739 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 SLC44A3Q8N4M1 653 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 MCPH1Q8NEM0 835 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 HASPINQ8TF76 798 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 HDAC7Q8WUI4 952 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 BSNDQ8WZ55 320 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms