RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 C7orf25Q9BPX7 421 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 BDH2Q9BUT1 245 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 LDAHQ9H6V9 325 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 BCO1Q9HAY6 547 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 SIK3Q9Y2K2 1263 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 FAM171A2A8MVW0 826 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 WNT10BO00744 389 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 HOXA3O43365 443 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 PRPF3O43395 683 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 RFPL1O75677 317 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 PARNO95453 639 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 POU2F2P09086 479 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 CRHR1P34998 444 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 PTPN7P35236 360 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 SREBF1P36956 1147 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 GZMKP49863 264 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 CTSWP56202 376 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 APBA1Q02410 837 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 FOXL1Q12952 345 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 FAM214AQ32MH5 1076 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 RRP12Q5JTH9 1297 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 CATIPQ7Z7H3 387 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 CCHCR1Q8TD31 782 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 HDAC10Q969S8 669 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 ARL8AQ96BM9 186 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 EPC1Q9H2F5 836 aa5.3□□□□□ -1.56
TOPBP1-204ENST00000505804 TSPAN6O43657 245 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 RAD17O75943 681 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 ENDOD1O94919 500 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 VCAM1P19320 739 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 CYP2C19P33261 490 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 MSX2P35548 267 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 FXR1P51114 621 aaKnown RBP eCLIP5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 PLP2Q04941 152 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 MRPL49Q13405 166 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 PRAMEF14Q5SWL7 426 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 GJC2Q5T442 439 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 MIGA2Q7L4E1 593 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 TRMT2AQ8IZ69 625 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 PRR18Q8N4B5 295 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 KAT5Q92993 513 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 RAB24Q969Q5 203 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 IL17RAQ96F46 866 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 LRGUKQ96M69 825 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 ZNF512Q96ME7 567 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 NUP88Q99567 741 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 PDCD2LQ9BRP1 358 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 GTPBP4Q9BZE4 634 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 MSL2Q9HCI7 577 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 PNMA8BQ9ULN7 279 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 SH3BP1Q9Y3L3 701 aa5.29□□□□□ -1.56
TOPBP1-204ENST00000505804 PATE3B3GLJ2 98 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 ZNF623O75123 536 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 AKAP5P24588 427 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 ICAM4Q14773 271 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 MFSD14BQ5SR56 506 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 FKBP15Q5T1M5 1219 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 USP45Q70EL2 814 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 PDZD4Q76G19 769 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 Q8TCH9 128 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 RELTQ969Z4 430 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 CEP95Q96GE4 821 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 SENP6Q9GZR1 1112 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 RAPGEFL1Q9UHV5 662 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 AJAP1Q9UKB5 411 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 PCDHB1Q9Y5F3 818 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 SLC30A1Q9Y6M5 507 aa5.28□□□□□ -1.56
TOPBP1-204ENST00000505804 MYBBP1AQ9BQG0 1328 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 AP1G1O43747 822 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 FOXD2O60548 495 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 AMY1AP04745 511 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 SYN1P17600 705 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 FPR1P21462 350 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 DSC2Q02487 901 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 ZNF267Q14586 743 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 IFIT1BQ5T764 474 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 FAM102BQ5T8I3 360 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 LILRA6Q6PI73 481 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 POLNQ7Z5Q5 900 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 XYLT1Q86Y38 959 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 WDR75Q8IWA0 830 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 ELOA2Q8IYF1 753 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 MYO1HQ8N1T3 1032 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 D2HGDHQ8N465 521 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 ZGPATQ8N5A5 531 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 DNERQ8NFT8 737 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 CXorf38Q8TB03 319 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 CYFIP2Q96F07 1278 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 LOXL4Q96JB6 756 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 WWC2-AS2Q96NR7 200 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 MANSC1Q9H8J5 431 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 LANCL2Q9NS86 450 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 TDP1Q9NUW8 608 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 CHPF2Q9P2E5 772 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 ST6GALNAC2Q9UJ37 374 aa5.27□□□□□ -1.57
TOPBP1-204ENST00000505804 MARCH6O60337 910 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 DDCP20711 480 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 LPOP22079 712 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 PCSK1P29120 753 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 GUCY1A2P33402 732 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms