RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 DUSP9Q99956 384 aaKnown RBP5.43□□□□□ -1.54
LMNB1-208ENST00000504788 CBWD1Q9BRT8 395 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 C2orf40Q9H1Z8 148 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 CDT1Q9H211 546 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 MRPL44Q9H9J2 332 aaKnown RBP5.43□□□□□ -1.54
LMNB1-208ENST00000504788 PRDM5Q9NQX1 630 aaPredicted RBP5.43□□□□□ -1.54
LMNB1-208ENST00000504788 CHST12Q9NRB3 414 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 PRMT7Q9NVM4 692 aaPredicted RBP5.43□□□□□ -1.54
LMNB1-208ENST00000504788 GINS2Q9Y248 185 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 SCN1AP35498 2009 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 PLXNA4Q9HCM2 1894 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 UBE4BO95155 1302 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 UNC80Q8N2C7 3258 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 VWA8A3KMH1 1905 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 TSC2P49815 1807 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 CCDC169A6NNP5 214 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 GOLGA6L22H0YM25 854 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 INO80B-WBP1J3KQ70 363 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 K7ENM7 598 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 GPR182O15218 404 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 TBCAO75347 108 aaKnown RBP5.42□□□□□ -1.54
LMNB1-208ENST00000504788 TOM1L1O75674 476 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 GCNT3O95395 438 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 EFEMP2O95967 443 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 AXLP30530 894 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 SMTNP53814 917 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 FPGSQ05932 587 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 ALCAMQ13740 583 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 NCAPHQ15003 741 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 SHHQ15465 462 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 MAPK6Q16659 721 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 KNOP1Q1ED39 458 aaKnown RBP5.42□□□□□ -1.54
LMNB1-208ENST00000504788 C1orf220Q5T0J3 134 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 CCDC183Q5T5S1 534 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 ISM2Q6H9L7 571 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 FAM109BQ6ICB4 259 aaPredicted RBP5.42□□□□□ -1.54
LMNB1-208ENST00000504788 CAVIN1Q6NZI2 390 aaKnown RBP5.42□□□□□ -1.54
LMNB1-208ENST00000504788 TMCO2Q7Z6W1 182 aaPredicted RBP5.42□□□□□ -1.54
LMNB1-208ENST00000504788 DEFB128Q7Z7B8 93 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 SLC9A9Q8IVB4 645 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 TMEM199Q8N511 208 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 SLC17A8Q8NDX2 589 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 DEPTORQ8TB45 409 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 DPF3Q92784 378 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 APBB2Q92870 758 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 SMARCE1Q969G3 411 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 TOP1MTQ969P6 601 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 IFT74Q96LB3 600 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 CCDC43Q96MW1 224 aaKnown RBP5.42□□□□□ -1.54
LMNB1-208ENST00000504788 ADAM2Q99965 735 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 INO80BQ9C086 356 aaPredicted RBP5.42□□□□□ -1.54
LMNB1-208ENST00000504788 NXF3Q9H4D5 531 aaKnown RBP5.42□□□□□ -1.54
LMNB1-208ENST00000504788 FAM105AQ9NUU6 356 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 KCNG1Q9UIX4 513 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 CPSF3Q9UKF6 684 aaKnown RBP5.42□□□□□ -1.54
LMNB1-208ENST00000504788 HES2Q9Y543 173 aa5.42□□□□□ -1.54
LMNB1-208ENST00000504788 ABHD14A-ACY1A0A1B0GW23 586 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 TTC26A0AVF1 554 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 TRIM49BA6NDI0 452 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 BIN1O00499 593 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 PDXKO00764 312 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 PTGESO14684 152 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 BAIAP3O94812 1187 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ARHGEF15O94989 841 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 KRT18P05783 430 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 SFPQP23246 707 aaKnown RBP eCLIP5.41□□□□□ -1.541e-7■■■■■ 32.9
LMNB1-208ENST00000504788 TNFSF9P41273 254 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 CLDN10P78369 228 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 HTRA4P83105 476 aaPredicted RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 NFX1Q12986 1120 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 PAK2Q13177 524 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 PPIGQ13427 754 aaKnown RBP eCLIP5.41□□□□□ -1.542e-6■■□□□ 11.4
LMNB1-208ENST00000504788 PRPF4BQ13523 1007 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ZBTB6Q15916 424 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ZSCAN23Q3MJ62 389 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 CLLU1OSQ5K130 101 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ATF7IP2Q5U623 682 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ANKRD40Q6AI12 368 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 SLC27A1Q6PCB7 646 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 MPZL3Q6UWV2 235 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 C11orf57Q6ZUT1 292 aaPredicted RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 SLC24A5Q71RS6 500 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 OTOP2Q7RTS6 562 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 CATSPER4Q7RTX7 472 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ECHDC2Q86YB7 292 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 TMEM130Q8N3G9 435 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 CCDC51Q96ER9 411 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ZMAT2Q96NC0 199 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 FTHL17Q9BXU8 183 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 MRPL4Q9BYD3 311 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 ELAC1Q9H777 363 aaKnown RBP5.41□□□□□ -1.54
LMNB1-208ENST00000504788 AGPAT3Q9NRZ7 376 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 EXOC1Q9NV70 894 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 MIOSQ9NXC5 875 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 PLAGL2Q9UPG8 496 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 MAPK8IP1Q9UQF2 711 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 IPPQ9Y573 584 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 PTPRJQ12913 1337 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 H0YCG3 227 aa5.41□□□□□ -1.54
LMNB1-208ENST00000504788 M0QZ92 97 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms