RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 C2CD6Q53TS8 623 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 IER5Q5VY09 327 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 TRIM65Q6PJ69 517 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 RAET1EQ8TD07 263 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 RFFLQ8WZ73 363 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 SLC5A5Q92911 643 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 CCDC97Q96F63 343 aaPredicted RBP15.07■□□□□ 0
TCOF1-207ENST00000504761 MAP3K20Q9NYL2 800 aaKnown RBP15.07■□□□□ 0
TCOF1-207ENST00000504761 SAMD15Q9P1V8 674 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 A8MXQ7 604 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 POC1B-GALNT4F8VUJ3 575 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 ATP9AO75110 1047 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 ADORA2BP29275 332 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 RFC5P40937 340 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 EPHB4P54760 987 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 RDM1Q8NG50 284 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 PPP1R13LQ8WUF5 828 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 KCNMB3Q9NPA1 279 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 FOXN3O00409 490 aaPredicted RBP15.07■□□□□ 0
TCOF1-207ENST00000504761 SCP2P22307 547 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 PON1P27169 355 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 BASP1P80723 227 aaKnown RBP15.07■□□□□ 0
TCOF1-207ENST00000504761 LAMC2Q13753 1193 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 CASP8Q14790 479 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 C4orf19Q8IY42 314 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 ANKS4BQ8N8V4 417 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 MMTAG2Q9BU76 263 aaKnown RBP15.07■□□□□ 0
TCOF1-207ENST00000504761 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.07■□□□□ 0
TCOF1-207ENST00000504761 SCINQ9Y6U3 715 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 PHRF1Q9P1Y6 1649 aaKnown RBP15.07■□□□□ 0
TCOF1-207ENST00000504761 CXCL11O14625 94 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
TCOF1-207ENST00000504761 LACRTQ9GZZ8 138 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 MROH8Q9H579 483 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 SNHG28P0DPA3 235 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 ATP5DP30049 168 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 ITIH3Q06033 890 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 ARMCX2Q7L311 632 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 REXO1L1PQ8IX06 675 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 MAGEB2O15479 319 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 VTNP04004 478 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 NOP14P78316 857 aaKnown RBP15.06■□□□□ 0
TCOF1-207ENST00000504761 ITKQ08881 620 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 TMEM132BQ14DG7 1078 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 KIZQ2M2Z5 673 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 SLC35G2Q8TBE7 412 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 FAN1Q9Y2M0 1017 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 PDE4DIPQ5VU43 2346 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 FAM237AA0A1B0GTK4 181 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 TBC1D12O60347 775 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 ECM1Q16610 540 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 SYT17Q9BSW7 474 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 KLHL11Q9NVR0 708 aa15.06■□□□□ 0
TCOF1-207ENST00000504761 GYS2P54840 703 aa15.05■□□□□ 0
TCOF1-207ENST00000504761 DGKDQ16760 1214 aa15.05■□□□□ 0
TCOF1-207ENST00000504761 GLRA4Q5JXX5 417 aa15.05■□□□□ 0
TCOF1-207ENST00000504761 CATSPERGQ6ZRH7 1159 aa15.05■□□□□ 0
TCOF1-207ENST00000504761 CEP128Q6ZU80 1094 aa15.05■□□□□ 0
TCOF1-207ENST00000504761 CCDC121Q6ZUS5 278 aa15.05■□□□□ 0
TCOF1-207ENST00000504761 RIPK3Q9Y572 518 aa15.05■□□□□ 0
TCOF1-207ENST00000504761 NFKBIEO00221 500 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 PDGFRBP09619 1106 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 ZNF286BP0CG31 522 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 YWHAGP61981 247 aaKnown RBP eCLIP15.05■□□□□ -0
TCOF1-207ENST00000504761 ATP11AP98196 1134 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 DARS2Q6PI48 645 aaKnown RBP15.05■□□□□ -0
TCOF1-207ENST00000504761 PLEKHH3Q7Z736 793 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 CEP57Q86XR8 500 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 SCN4BQ8IWT1 228 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 KCTD17Q8N5Z5 321 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 RBBP8NLQ8NC74 664 aaPredicted RBP15.05■□□□□ -0
TCOF1-207ENST00000504761 SPATA4Q8NEY3 305 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 KLRG1Q96E93 195 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 TMEM8AQ9HCN3 771 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 FAM114A2Q9NRY5 505 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 KCNJ6P48051 423 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 ALDH5A1P51649 535 aaPredicted RBP15.05■□□□□ -0
TCOF1-207ENST00000504761 GNGT1P63211 74 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 PPP2R5CQ13362 524 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 ENOSF1Q7L5Y1 443 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 VSIG10LQ86VR7 867 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 C4orf32Q8N8J7 132 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 ANAPC5Q9UJX4 755 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 SNX12Q9UMY4 172 aa15.05■□□□□ -0
TCOF1-207ENST00000504761 KLRC4O43908 158 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 RFX1P22670 979 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 RGS7P49802 495 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 SLC12A3P55017 1021 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 FAM102AQ5T9C2 384 aaPredicted RBP15.04■□□□□ -0
TCOF1-207ENST00000504761 TAOK1Q7L7X3 1001 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 NSMCE1Q8WV22 266 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 TTC7AQ9ULT0 858 aaPredicted RBP15.04■□□□□ -0
TCOF1-207ENST00000504761 MIF4GDA9UHW6 222 aaKnown RBP15.04■□□□□ -0
TCOF1-207ENST00000504761 PI4K2BG5E9Z4 385 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 MCF2LO15068 1137 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 PSMD10O75832 226 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 PPM1FP49593 454 aaPredicted RBP15.04■□□□□ -0
TCOF1-207ENST00000504761 PPATQ06203 517 aa15.04■□□□□ -0
TCOF1-207ENST00000504761 HHATQ5VTY9 493 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms