RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 THAP9Q9H5L6 903 aa15.12■□□□□ 0.01
CYSTM1-202ENST00000504227 KIAA1586Q9HCI6 787 aa15.12■□□□□ 0.01
CYSTM1-202ENST00000504227 DMAC2Q9NW81 257 aa15.12■□□□□ 0.01
CYSTM1-202ENST00000504227 FRMD4BQ9Y2L6 1034 aa15.12■□□□□ 0.01
CYSTM1-202ENST00000504227 OGTO15294 1046 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 EXTL3O43909 919 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 GNA14O95837 355 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 HARSP12081 509 aaKnown RBP15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 NCAPHQ15003 741 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 KYAT1Q16773 422 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 CEP135Q66GS9 1140 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 TWF2Q6IBS0 349 aaKnown RBP15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 MFSD5Q6N075 450 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 CDR2LQ86X02 465 aaPredicted RBP15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 FAM114A1Q8IWE2 563 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 ZC3H3Q8IXZ2 948 aaKnown RBP15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 DPF3Q92784 378 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 APBB2Q92870 758 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 SAAL1Q96ER3 474 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 FTHL17Q9BXU8 183 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 TRIM6Q9C030 488 aaPredicted RBP15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 CDT1Q9H211 546 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 FANCLQ9NW38 375 aa15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 MAGEC2Q9UBF1 373 aaPredicted RBP15.11■□□□□ 0.01
CYSTM1-202ENST00000504227 SIP14410 1827 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 BRCA2P51587 3418 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 GOLGA8IPA6NC78 632 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 GOLGA8JA6NMD2 632 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 ABLIM1O14639 778 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 NPTXRO95502 500 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 CXCL10P02778 98 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 EPB41P11171 864 aaKnown RBP15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 CDK11BP21127 795 aaKnown RBP15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 PSMC2P35998 433 aaKnown RBP15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 DSC3Q14574 896 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 GPNMBQ14956 572 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 PLEKHG4Q58EX7 1191 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 LRRC55Q6ZSA7 311 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 DEFB128Q7Z7B8 93 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 CREBRFQ8IUR6 639 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 RPUSD2Q8IZ73 545 aaKnown RBP15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 GPD1LQ8N335 351 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 DBF4BQ8NFT6 615 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 EEF2KMTQ96G04 330 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 ADAM2Q99965 735 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 FAM213AQ9BRX8 229 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 HAPLN2Q9GZV7 340 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 RBSNQ9H1K0 784 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 TMX1Q9H3N1 280 aa15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 SAMSN1Q9NSI8 373 aaKnown RBP15.1■□□□□ 0.01
CYSTM1-202ENST00000504227 ZNF233A6NK53 670 aa15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 SLC16A3O15427 465 aaKnown RBP15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 CLTAP09496 248 aa15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 SKIP12755 728 aa15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 CCDC40Q4G0X9 1142 aa15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 UBXN11Q5T124 520 aa15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 FAM186BQ8IYM0 893 aa15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 THNSL1Q8IYQ7 743 aa15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 RDH13Q8NBN7 331 aa15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 ANKRD20A12PQ8NF67 263 aa15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 MKNK1Q9BUB5 465 aa15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 EIF2AQ9BY44 585 aaKnown RBP15.09■□□□□ 0.01
CYSTM1-202ENST00000504227 MAPK13O15264 365 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 AKAP3O75969 853 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 STAG3L1P0CL83 205 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 KRT13P13646 458 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 ITGB8P26012 769 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 GRM5P41594 1212 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 CASP4P49662 377 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 ACOT2P49753 483 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 RAB27AP51159 221 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 SPAG1Q07617 926 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 SNRNP35Q16560 246 aaKnown RBP15.08■□□□□ 0
CYSTM1-202ENST00000504227 HSP90AA4PQ58FG1 418 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 CDKAL1Q5VV42 579 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 FRMD5Q7Z6J6 570 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 HACE1Q8IYU2 909 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 FBXL18Q96ME1 805 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 CCDC94Q9BW85 323 aaPredicted RBP15.08■□□□□ 0
CYSTM1-202ENST00000504227 TRAIPQ9BWF2 469 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 METTL14Q9HCE5 456 aaKnown RBP15.08■□□□□ 0
CYSTM1-202ENST00000504227 RGS18Q9NS28 235 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 C1orf112Q9NSG2 853 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 PCDHB2Q9Y5E7 798 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 NR2E3Q9Y5X4 410 aa15.08■□□□□ 0
CYSTM1-202ENST00000504227 KCNJ18B7U540 433 aa15.07■□□□□ 0
CYSTM1-202ENST00000504227 TULP1O00294 542 aaPredicted RBP15.07■□□□□ 0
CYSTM1-202ENST00000504227 ENPP3O14638 875 aa15.07■□□□□ 0
CYSTM1-202ENST00000504227 MGEA5O60502 916 aa15.07■□□□□ 0
CYSTM1-202ENST00000504227 PFKMP08237 780 aa15.07■□□□□ 0
CYSTM1-202ENST00000504227 CSF2RAP15509 400 aa15.07■□□□□ 0
CYSTM1-202ENST00000504227 EEF1GP26641 437 aaKnown RBP15.07■□□□□ 0
CYSTM1-202ENST00000504227 MTIF2P46199 727 aaKnown RBP15.07■□□□□ 0
CYSTM1-202ENST00000504227 OSTNP61366 133 aa15.07■□□□□ 0
CYSTM1-202ENST00000504227 POU5F1Q01860 360 aaKnown RBP15.07■□□□□ 0
CYSTM1-202ENST00000504227 PPIGQ13427 754 aaKnown RBP eCLIP15.07■□□□□ 0
CYSTM1-202ENST00000504227 IKBKEQ14164 716 aa15.07■□□□□ 0
CYSTM1-202ENST00000504227 KCNJ12Q14500 433 aa15.07■□□□□ 0
CYSTM1-202ENST00000504227 SEZ6Q53EL9 994 aa15.07■□□□□ 0
CYSTM1-202ENST00000504227 CNKSR3Q6P9H4 555 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms