RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 ENDOUP21128 410 aaKnown RBP6.36□□□□□ -1.39
LINC01340-201ENST00000504012 MUTP22033 750 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 PHBP35232 272 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 BCAP31P51572 246 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 CHN2P52757 468 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 EVA1CP58658 441 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 AP2B1P63010 937 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 IFI35P80217 286 aaPredicted RBP6.36□□□□□ -1.39
LINC01340-201ENST00000504012 CDR2Q01850 454 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 KLRC3Q07444 240 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 NR1H3Q13133 447 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 MOGSQ13724 837 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 EIF4A2Q14240 407 aaKnown RBP6.36□□□□□ -1.39
LINC01340-201ENST00000504012 LPIN1Q14693 890 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 TRADDQ15628 312 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 NTRK3Q16288 839 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 TRMT5Q32P41 509 aaKnown RBP6.36□□□□□ -1.39
LINC01340-201ENST00000504012 ZNF568Q3ZCX4 644 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 ZC2HC1CQ53FD0 456 aaPredicted RBP6.36□□□□□ -1.39
LINC01340-201ENST00000504012 SULT6B1Q6IMI4 303 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 CCSAPQ6IQ19 270 aaPredicted RBP6.36□□□□□ -1.39
LINC01340-201ENST00000504012 NIPAL1Q6NVV3 410 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 TTI2Q6NXR4 508 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 TTC23LQ6PF05 361 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 AGMOQ6ZNB7 445 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 CYB5R4Q7L1T6 521 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 ZNF804AQ7Z570 1209 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 SLFN11Q7Z7L1 901 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 RHOT2Q8IXI1 618 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 KLHL7Q8IXQ5 586 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 CYP4X1Q8N118 509 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 USP6NLQ92738 828 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 COG3Q96JB2 828 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 LRGUKQ96M69 825 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 CTRCQ99895 268 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 SGIP1Q9BQI5 828 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 ERP44Q9BS26 406 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 CDK19Q9BWU1 502 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 CADM1Q9BY67 442 aaKnown RBP6.36□□□□□ -1.39
LINC01340-201ENST00000504012 PITPNM3Q9BZ71 974 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 MTFR1LQ9H019 292 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 PARVGQ9HBI0 331 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 USP29Q9HBJ7 922 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 UBN1Q9NPG3 1134 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 COPRSQ9NQ92 184 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 ATAD3AQ9NVI7 634 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 SMARCAL1Q9NZC9 954 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 CRNNQ9UBG3 495 aaPredicted RBP6.36□□□□□ -1.39
LINC01340-201ENST00000504012 MTRF1LQ9UGC7 380 aaKnown RBP6.36□□□□□ -1.39
LINC01340-201ENST00000504012 LGALS13Q9UHV8 139 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 HAO1Q9UJM8 370 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 ASAP1Q9ULH1 1129 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 STX8Q9UNK0 236 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 TFR2Q9UP52 801 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 CHKBQ9Y259 395 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 TSC22D4Q9Y3Q8 395 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 CD2APQ9Y5K6 639 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 N6AMT1Q9Y5N5 214 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 AK5Q9Y6K8 562 aa6.36□□□□□ -1.39
LINC01340-201ENST00000504012 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.36□□□□□ -1.39
LINC01340-201ENST00000504012 SLIT3O75094 1523 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 MRC2Q9UBG0 1479 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 FUOMA2VDF0 154 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 RASA4BC9J798 803 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 H0Y3Z8 333 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 KRIT1O00522 736 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 PODXLO00592 558 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 SLC22A1O15245 554 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 RASA4O43374 803 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 OPHN1O60890 802 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 RHOBTB3O94955 611 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 S100BP04271 92 aaPredicted RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 RPN1P04843 607 aaKnown RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 TFAP2AP05549 437 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 ATP5BP06576 529 aaKnown RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 ZCCHC18P0CG32 403 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 ANPEPP15144 967 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CCNE1P24864 410 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 EPHB2P29323 1055 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 TKTP29401 623 aaKnown RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CA8P35219 290 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 LONP1P36776 959 aaKnown RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 PRCPP42785 496 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 VPS41P49754 854 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 METAP2P50579 478 aaKnown RBP eCLIP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 NR1H2P55055 460 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 PTENP60484 403 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 RPS3AP61247 264 aaKnown RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CTAG1AP78358 180 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 LRRC63Q05C16 580 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 SSRP1Q08945 709 aaKnown RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 E2F2Q14209 437 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 PPP2R5BQ15173 497 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 Q3C1V9 767 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 SLC9C1Q4G0N8 1177 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 ACSBG2Q5FVE4 666 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 C6orf163Q5TEZ5 329 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CGB2Q6NT52 195 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 PDXDC2PQ6P474 469 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 KLHDC10Q6PID8 442 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms