RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 ACBD3Q9H3P7 528 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 ACP6Q9NPH0 428 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 RAB20Q9NX57 234 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 COG5Q9UP83 839 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 CYP26A1O43174 497 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 TNFRSF8P28908 595 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 PRPF4BQ13523 1007 aaKnown RBP24.28■■□□□ 1.48
PCDH1-204ENST00000503492 AMFRQ9UKV5 643 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 A0A0U1RQG5 324 aaPredicted RBP24.27■■□□□ 1.48
PCDH1-204ENST00000503492 ARL2P36404 184 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 LIG4P49917 911 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 GYS2P54840 703 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 FAM193AP78312 1265 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 USP37Q86T82 979 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 SCFD2Q8WU76 684 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 UPF1Q92900 1129 aaKnown RBP eCLIP24.27■■□□□ 1.48
PCDH1-204ENST00000503492 CCDC102AQ96A19 550 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 FAM84AQ96KN4 292 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 NT5C1BQ96P26 610 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 FTLP02792 175 aaPredicted RBP24.27■■□□□ 1.48
PCDH1-204ENST00000503492 ABCD1P33897 745 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 TAF3Q5VWG9 929 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 SLC47A2Q86VL8 602 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 PLEKHA4Q9H4M7 779 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 SPON1Q9HCB6 807 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 GDF3Q9NR23 364 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 KCNG1Q9UIX4 513 aa24.27■■□□□ 1.48
PCDH1-204ENST00000503492 ZNF233A6NK53 670 aa24.26■■□□□ 1.47
PCDH1-204ENST00000503492 CXCL11O14625 94 aa24.26■■□□□ 1.47
PCDH1-204ENST00000503492 HEXIM1O94992 359 aaKnown RBP24.26■■□□□ 1.47
PCDH1-204ENST00000503492 ENPEPQ07075 957 aa24.26■■□□□ 1.47
PCDH1-204ENST00000503492 ZNF771Q7L3S4 317 aaPredicted RBP24.26■■□□□ 1.47
PCDH1-204ENST00000503492 EEPD1Q7L9B9 569 aa24.26■■□□□ 1.47
PCDH1-204ENST00000503492 ANKRD13AQ8IZ07 590 aa24.26■■□□□ 1.47
PCDH1-204ENST00000503492 KCNN1Q92952 543 aa24.26■■□□□ 1.47
PCDH1-204ENST00000503492 TATDN2Q93075 761 aa24.26■■□□□ 1.47
PCDH1-204ENST00000503492 STYXL1Q9Y6J8 313 aa24.26■■□□□ 1.47
PCDH1-204ENST00000503492 ZSCAN5CA6NGD5 496 aaPredicted RBP24.25■■□□□ 1.47
PCDH1-204ENST00000503492 EXTL3O43909 919 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 NAMPTP43490 491 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 AARSP49588 968 aaKnown RBP eCLIP24.25■■□□□ 1.47
PCDH1-204ENST00000503492 SND1Q7KZF4 910 aaKnown RBP eCLIP24.25■■□□□ 1.47
PCDH1-204ENST00000503492 RASGEF1CQ8N431 466 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 SLC7A3Q8WY07 619 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 ZNF516Q92618 1163 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.25■■□□□ 1.47
PCDH1-204ENST00000503492 NOC2LQ9Y3T9 749 aaKnown RBP24.25■■□□□ 1.47
PCDH1-204ENST00000503492 LRRIQ4A6NIV6 560 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 SPDYE5A6NIY4 337 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 TNNC1P63316 161 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 STRN3Q13033 797 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 NEDD9Q14511 834 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 TARBP2Q15633 366 aaKnown RBP24.25■■□□□ 1.47
PCDH1-204ENST00000503492 KLHL7Q8IXQ5 586 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 CDCA5Q96FF9 252 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 HAPLN2Q9GZV7 340 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 TXNRD2Q9NNW7 524 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 LRRC37A2A6NM11 1700 aa24.25■■□□□ 1.47
PCDH1-204ENST00000503492 PGRMC1O00264 195 aaKnown RBP24.24■■□□□ 1.47
PCDH1-204ENST00000503492 RTN2O75298 545 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 RHOT2Q8IXI1 618 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 IFT20Q8IY31 132 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 PSPC1Q8WXF1 523 aaKnown RBP24.24■■□□□ 1.47
PCDH1-204ENST00000503492 PI4K2AQ9BTU6 479 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 EPB41L5Q9HCM4 733 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 DDX3YO15523 660 aaKnown RBP24.24■■□□□ 1.47
PCDH1-204ENST00000503492 RAD51CO43502 376 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 GGPS1O95749 300 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 STAT5BP51692 787 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 EPHB4P54760 987 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 WNT7BP56706 349 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 GUCY2DQ02846 1103 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 LY6KQ17RY6 165 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 C15orf39Q6ZRI6 1047 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 DEPTORQ8TB45 409 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 FAM71BQ8TC56 605 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 DHX38Q92620 1227 aaKnown RBP24.24■■□□□ 1.47
PCDH1-204ENST00000503492 KIAA1586Q9HCI6 787 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 VPS18Q9P253 973 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 AGTPBP1Q9UPW5 1226 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 FAN1Q9Y2M0 1017 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 SIP14410 1827 aa24.24■■□□□ 1.47
PCDH1-204ENST00000503492 SYF2O95926 243 aaKnown RBP24.23■■□□□ 1.47
PCDH1-204ENST00000503492 PGK2P07205 417 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 MMEP08473 750 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 CARSP49589 748 aaKnown RBP24.23■■□□□ 1.47
PCDH1-204ENST00000503492 HADHBP55084 474 aaKnown RBP24.23■■□□□ 1.47
PCDH1-204ENST00000503492 NLRP11P59045 1033 aaKnown RBP24.23■■□□□ 1.47
PCDH1-204ENST00000503492 FMO1Q01740 532 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 HSP90B2PQ58FF3 399 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 LMBRD2Q68DH5 695 aaPredicted RBP24.23■■□□□ 1.47
PCDH1-204ENST00000503492 ZBTB45Q96K62 511 aaPredicted RBP24.23■■□□□ 1.47
PCDH1-204ENST00000503492 FGD4Q96M96 766 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 AP1M1Q9BXS5 423 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 MED4Q9NPJ6 270 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 NRBP2Q9NSY0 501 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 KCNH4Q9UQ05 1017 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 ESYT3A0FGR9 886 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 K7ERI5 159 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 PIGRP01833 764 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms