RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 PPIL6Q8IXY8 311 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 FIBCD1Q8N539 461 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 EFHBQ8N7U6 833 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 RNF214Q8ND24 703 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 C1orf131Q8NDD1 294 aaKnown RBP8.28□□□□□ -1.08
PTCD2-206ENST00000503315 EAF2Q96CJ1 260 aaPredicted RBP8.28□□□□□ -1.08
PTCD2-206ENST00000503315 PGBD4Q96DM1 585 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 C1orf159Q96HA4 380 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 TRIM47Q96LD4 638 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 CCDC138Q96M89 665 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 PHF20Q9BVI0 1012 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 NAA15Q9BXJ9 866 aaKnown RBP8.28□□□□□ -1.08
PTCD2-206ENST00000503315 ARFGAP3Q9NP61 516 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.28□□□□□ -1.08
PTCD2-206ENST00000503315 SRRDQ9UH36 339 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 DBNLQ9UJU6 430 aaKnown RBP8.28□□□□□ -1.08
PTCD2-206ENST00000503315 RNF112Q9ULX5 631 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 LRCH1Q9Y2L9 728 aa8.28□□□□□ -1.08
PTCD2-206ENST00000503315 GPR55Q9Y2T6 319 aaPredicted RBP8.28□□□□□ -1.08
PTCD2-206ENST00000503315 SYNGAP1Q96PV0 1343 aa8.27□□□□□ -1.08
PTCD2-206ENST00000503315 GOLGA8AA7E2F4 631 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 GOLGA8BA8MQT2 603 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 PQBP1O60828 265 aaKnown RBP8.27□□□□□ -1.09
PTCD2-206ENST00000503315 CST3P01034 146 aaPredicted RBP8.27□□□□□ -1.09
PTCD2-206ENST00000503315 SOD2P04179 222 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 CTSBP07858 339 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 BMP4P12644 408 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 ALDH5A1P51649 535 aaPredicted RBP8.27□□□□□ -1.09
PTCD2-206ENST00000503315 PCBP4P57723 403 aaKnown RBP8.27□□□□□ -1.09
PTCD2-206ENST00000503315 PRR20EP86478 221 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 PRR20CP86479 221 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 PRR20DP86480 221 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 PRR20BP86481 221 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 PRR20AP86496 221 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 CTBSQ01459 385 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 PAK1Q13153 545 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 TRIM14Q14142 442 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 BROXQ5VW32 411 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 NAA16Q6N069 864 aaPredicted RBP8.27□□□□□ -1.09
PTCD2-206ENST00000503315 CEP85Q6P2H3 762 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 B3GNT9Q6UX72 402 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 ADGRA1Q86SQ6 560 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 TEX11Q8IYF3 940 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 KLHL23Q8NBE8 558 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 SH3RF3Q8TEJ3 882 aaPredicted RBP8.27□□□□□ -1.09
PTCD2-206ENST00000503315 CDK5RAP3Q96JB5 506 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 TEKT5Q96M29 485 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 ZFP42Q96MM3 310 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 PARK7Q99497 189 aaKnown RBP8.27□□□□□ -1.09
PTCD2-206ENST00000503315 DSCC1Q9BVC3 393 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 DHX36Q9H2U1 1008 aaKnown RBP8.27□□□□□ -1.09
PTCD2-206ENST00000503315 PRDM6Q9NQX0 595 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 AATFQ9NY61 560 aaKnown RBP eCLIP8.27□□□□□ -1.09
PTCD2-206ENST00000503315 PI4KBQ9UBF8 816 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 DNM3Q9UQ16 869 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 RABGAP1Q9Y3P9 1069 aa8.27□□□□□ -1.09
PTCD2-206ENST00000503315 NOC2LQ9Y3T9 749 aaKnown RBP8.27□□□□□ -1.09
PTCD2-206ENST00000503315 SHOXO15266 292 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 EPB41L2O43491 1005 aaKnown RBP8.26□□□□□ -1.09
PTCD2-206ENST00000503315 BAG3O95817 575 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 FAM193AP78312 1265 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 SPP2Q13103 211 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 SUZ12Q15022 739 aaKnown RBP8.26□□□□□ -1.09
PTCD2-206ENST00000503315 HYIQ5T013 277 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 GADL1Q6ZQY3 521 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 SKAP1Q86WV1 359 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 NKAPQ8N5F7 415 aaKnown RBP8.26□□□□□ -1.09
PTCD2-206ENST00000503315 TGFBRAP1Q8WUH2 860 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 ATXN3LQ9H3M9 355 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 HERC5Q9UII4 1024 aaKnown RBP8.26□□□□□ -1.09
PTCD2-206ENST00000503315 GABRQQ9UN88 632 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 AGTPBP1Q9UPW5 1226 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 PCDHGC5Q9Y5F6 944 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 PLXNB2O15031 1838 aa8.26□□□□□ -1.09
PTCD2-206ENST00000503315 DYTNA2CJ06 578 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 MEFVO15553 781 aaPredicted RBP8.25□□□□□ -1.09
PTCD2-206ENST00000503315 PCDHGA12O60330 932 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 AFF1P51825 1210 aaKnown RBP8.25□□□□□ -1.09
PTCD2-206ENST00000503315 NLRP12P59046 1061 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 PTSQ03393 145 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 NKG7Q16617 165 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 PRR16Q569H4 304 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 TREML2Q5T2D2 321 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 FOXP4Q8IVH2 680 aaPredicted RBP8.25□□□□□ -1.09
PTCD2-206ENST00000503315 CLASRPQ8N2M8 674 aaKnown RBP8.25□□□□□ -1.09
PTCD2-206ENST00000503315 RAET1EQ8TD07 263 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 ZNF837Q96EG3 531 aaPredicted RBP8.25□□□□□ -1.09
PTCD2-206ENST00000503315 TBATAQ96M53 351 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 MAP3K14Q99558 947 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 NOL10Q9BSC4 688 aaKnown RBP8.25□□□□□ -1.09
PTCD2-206ENST00000503315 DNAJC18Q9H819 358 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 SSU72Q9NP77 194 aaKnown RBP8.25□□□□□ -1.09
PTCD2-206ENST00000503315 PIH1D3Q9NQM4 214 aaKnown RBP8.25□□□□□ -1.09
PTCD2-206ENST00000503315 GPR27Q9NS67 375 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 PRR13Q9NZ81 148 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 PALD1Q9ULE6 856 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 PCDHGA9Q9Y5G4 932 aaKnown RBP8.25□□□□□ -1.09
PTCD2-206ENST00000503315 PCDHGA8Q9Y5G5 932 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 PCDHGA7Q9Y5G6 932 aa8.25□□□□□ -1.09
PTCD2-206ENST00000503315 PCDHGA6Q9Y5G7 932 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms