RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 OR6J1Q8NGC5 347 aa23.85■■□□□ 1.41
PTPN13-205ENST00000502971 TRAPPC12Q8WVT3 735 aa23.85■■□□□ 1.41
PTPN13-205ENST00000502971 C16orf70Q9BSU1 422 aa23.85■■□□□ 1.41
PTPN13-205ENST00000502971 CFHR5Q9BXR6 569 aa23.85■■□□□ 1.41
PTPN13-205ENST00000502971 MRPL4Q9BYD3 311 aaKnown RBP23.85■■□□□ 1.41
PTPN13-205ENST00000502971 MRFAP1Q9Y605 127 aa23.85■■□□□ 1.41
PTPN13-205ENST00000502971 A0A0B4J269 797 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 SRGAP2CP0DJJ0 459 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 INSRRP14616 1297 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 VEGFBP49765 207 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 ZNF571Q7Z3V5 609 aaPredicted RBP23.84■■□□□ 1.41
PTPN13-205ENST00000502971 VPS36Q86VN1 386 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 SECISBP2LQ93073 1101 aaKnown RBP23.84■■□□□ 1.41
PTPN13-205ENST00000502971 MSCO60682 206 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 GFPT2O94808 682 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 CLDN10P78369 228 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 MAP2K1Q02750 393 aaPredicted RBP23.84■■□□□ 1.41
PTPN13-205ENST00000502971 ENOX2Q16206 610 aaKnown RBP23.84■■□□□ 1.41
PTPN13-205ENST00000502971 MAPK6Q16659 721 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 RHPN2Q8IUC4 686 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 USP6NLQ92738 828 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 MSTO1Q9BUK6 570 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 GPR88Q9GZN0 384 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 ADAMTS1Q9UHI8 967 aa23.84■■□□□ 1.41
PTPN13-205ENST00000502971 A0A087X0T9 212 aa23.83■■□□□ 1.41
PTPN13-205ENST00000502971 MMP3P08254 477 aa23.83■■□□□ 1.41
PTPN13-205ENST00000502971 FAM228BP0C875 321 aa23.83■■□□□ 1.41
PTPN13-205ENST00000502971 GPC3P51654 580 aa23.83■■□□□ 1.41
PTPN13-205ENST00000502971 TNFAIP2Q03169 654 aa23.83■■□□□ 1.41
PTPN13-205ENST00000502971 POU5F1BQ06416 359 aa23.83■■□□□ 1.41
PTPN13-205ENST00000502971 ZBTB45Q96K62 511 aaPredicted RBP23.83■■□□□ 1.41
PTPN13-205ENST00000502971 HAPLN2Q9GZV7 340 aa23.83■■□□□ 1.41
PTPN13-205ENST00000502971 UBE2TQ9NPD8 197 aaPredicted RBP23.83■■□□□ 1.41
PTPN13-205ENST00000502971 H3BRB1 525 aa23.82■■□□□ 1.4
PTPN13-205ENST00000502971 EVI5O60447 810 aa23.82■■□□□ 1.4
PTPN13-205ENST00000502971 EDN1P05305 212 aa23.82■■□□□ 1.4
PTPN13-205ENST00000502971 PRKCBP05771 671 aa23.82■■□□□ 1.4
PTPN13-205ENST00000502971 MATR3P43243 847 aaKnown RBP eCLIP23.82■■□□□ 1.4
PTPN13-205ENST00000502971 NLRP11P59045 1033 aaKnown RBP23.82■■□□□ 1.4
PTPN13-205ENST00000502971 DGKDQ16760 1214 aa23.82■■□□□ 1.4
PTPN13-205ENST00000502971 METTL13Q8N6R0 699 aa23.82■■□□□ 1.4
PTPN13-205ENST00000502971 FBXL13Q8NEE6 735 aa23.82■■□□□ 1.4
PTPN13-205ENST00000502971 POP1Q99575 1024 aaKnown RBP23.82■■□□□ 1.4
PTPN13-205ENST00000502971 NFKBIZQ9BYH8 718 aa23.82■■□□□ 1.4
PTPN13-205ENST00000502971 TUT1Q9H6E5 874 aaKnown RBP23.82■■□□□ 1.4
PTPN13-205ENST00000502971 DUSP10Q9Y6W6 482 aa23.82■■□□□ 1.4
PTPN13-205ENST00000502971 TOM1L1O75674 476 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 ZNF286BP0CG31 522 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 DLATP10515 647 aaKnown RBP23.81■■□□□ 1.4
PTPN13-205ENST00000502971 KLRC1P26715 233 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 BMS1Q14692 1282 aaKnown RBP23.81■■□□□ 1.4
PTPN13-205ENST00000502971 CRELD2Q6UXH1 353 aaPredicted RBP23.81■■□□□ 1.4
PTPN13-205ENST00000502971 SV2AQ7L0J3 742 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 FNBP1Q96RU3 617 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 ACO2Q99798 780 aaKnown RBP23.81■■□□□ 1.4
PTPN13-205ENST00000502971 RAB20Q9NX57 234 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 ANKFY1Q9P2R3 1169 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 ATP8B3O60423 1300 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 CLDN3O15551 220 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 RGS2P41220 211 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 ACOT2P49753 483 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 CLCN3P51790 818 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 IGBP1P78318 339 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 ARHGAP44Q17R89 818 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 OLFML2BQ68BL8 750 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 ARHGEF19Q8IW93 802 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 RNF10Q8N5U6 811 aaKnown RBP23.81■■□□□ 1.4
PTPN13-205ENST00000502971 LINC01465Q8N7H1 131 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 TRIM58Q8NG06 486 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 SOCS4Q8WXH5 440 aa23.81■■□□□ 1.4
PTPN13-205ENST00000502971 MACROD2A1Z1Q3 448 aa23.8■■□□□ 1.4
PTPN13-205ENST00000502971 ZC3H11AO75152 810 aaKnown RBP eCLIP23.8■■□□□ 1.4
PTPN13-205ENST00000502971 TACC1O75410 805 aa23.8■■□□□ 1.4
PTPN13-205ENST00000502971 PTENP60484 403 aa23.8■■□□□ 1.4
PTPN13-205ENST00000502971 KIF22Q14807 665 aa23.8■■□□□ 1.4
PTPN13-205ENST00000502971 NAB2Q15742 525 aa23.8■■□□□ 1.4
PTPN13-205ENST00000502971 C15orf39Q6ZRI6 1047 aa23.8■■□□□ 1.4
PTPN13-205ENST00000502971 SEMA4DQ92854 862 aa23.8■■□□□ 1.4
PTPN13-205ENST00000502971 FZD8Q9H461 694 aa23.8■■□□□ 1.4
PTPN13-205ENST00000502971 TOPORSQ9NS56 1045 aaPredicted RBP23.8■■□□□ 1.4
PTPN13-205ENST00000502971 RBAKQ9NYW8 714 aaPredicted RBP23.8■■□□□ 1.4
PTPN13-205ENST00000502971 CDC23Q9UJX2 597 aa23.8■■□□□ 1.4
PTPN13-205ENST00000502971 ACKR2O00590 384 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 PNMA6AP0CW24 399 aaPredicted RBP23.79■■□□□ 1.4
PTPN13-205ENST00000502971 TMOD1P28289 359 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 MFAP3P55082 362 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 MNS1Q8NEH6 495 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 FAM81BQ96LP2 452 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 NLRP4Q96MN2 994 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 FLRT1Q9NZU1 646 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 NENFQ9UMX5 172 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 GNEQ9Y223 722 aaKnown RBP23.79■■□□□ 1.4
PTPN13-205ENST00000502971 ANO9A1A5B4 782 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 FOXN3O00409 490 aaPredicted RBP23.79■■□□□ 1.4
PTPN13-205ENST00000502971 HSPA6P17066 643 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 TSHZ1Q6ZSZ6 1077 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 TAS1R2Q8TE23 839 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 NT5C1BQ96P26 610 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 NAGPAQ9UK23 515 aa23.79■■□□□ 1.4
PTPN13-205ENST00000502971 GJD2Q9UKL4 321 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms