RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GLB1LQ6UWU2 654 aa27.53■■■□□ 2
LSM6-202ENST00000502781 Q7L0L9 218 aa27.53■■■□□ 2
LSM6-202ENST00000502781 APBB1IPQ7Z5R6 666 aaPredicted RBP27.53■■■□□ 2
LSM6-202ENST00000502781 ABI1Q8IZP0 508 aa27.53■■■□□ 2
LSM6-202ENST00000502781 HPS3Q969F9 1004 aa27.53■■■□□ 2
LSM6-202ENST00000502781 ZBTB45Q96K62 511 aaPredicted RBP27.53■■■□□ 2
LSM6-202ENST00000502781 FNDC1Q4ZHG4 1894 aaPredicted RBP27.53■■■□□ 2
LSM6-202ENST00000502781 NR1I2O75469 434 aa27.52■■■□□ 2
LSM6-202ENST00000502781 GCNT3O95395 438 aa27.52■■■□□ 2
LSM6-202ENST00000502781 PRR29P0C7W0 189 aa27.52■■■□□ 2
LSM6-202ENST00000502781 MYBP10242 640 aa27.52■■■□□ 2
LSM6-202ENST00000502781 MCF2P10911 925 aa27.52■■■□□ 2
LSM6-202ENST00000502781 MCL1Q07820 350 aa27.52■■■□□ 2
LSM6-202ENST00000502781 ZNF568Q3ZCX4 644 aa27.52■■■□□ 2
LSM6-202ENST00000502781 L1TD1Q5T7N2 865 aaKnown RBP27.52■■■□□ 2
LSM6-202ENST00000502781 LRRC55Q6ZSA7 311 aa27.52■■■□□ 2
LSM6-202ENST00000502781 HACE1Q8IYU2 909 aa27.52■■■□□ 2
LSM6-202ENST00000502781 DEFB123Q8N688 67 aa27.52■■■□□ 2
LSM6-202ENST00000502781 SAMD11Q96NU1 681 aa27.52■■■□□ 2
LSM6-202ENST00000502781 GIT1Q9Y2X7 761 aa27.52■■■□□ 2
LSM6-202ENST00000502781 HNRNPDLO14979 420 aaKnown RBP27.51■■□□□ 1.99
LSM6-202ENST00000502781 KCNA1Q09470 495 aa27.51■■□□□ 1.99
LSM6-202ENST00000502781 GRIN2CQ14957 1233 aa27.51■■□□□ 1.99
LSM6-202ENST00000502781 NOMO2Q5JPE7 1267 aa27.51■■□□□ 1.99
LSM6-202ENST00000502781 SLC39A4Q6P5W5 647 aa27.51■■□□□ 1.99
LSM6-202ENST00000502781 EPM2AIP1Q7L775 607 aaPredicted RBP27.51■■□□□ 1.99
LSM6-202ENST00000502781 LRRC43Q8N309 656 aa27.51■■□□□ 1.99
LSM6-202ENST00000502781 GLIS3Q8NEA6 775 aa27.51■■□□□ 1.99
LSM6-202ENST00000502781 C17orf80Q9BSJ5 609 aa27.51■■□□□ 1.99
LSM6-202ENST00000502781 MRPL9Q9BYD2 267 aaKnown RBP27.51■■□□□ 1.99
LSM6-202ENST00000502781 HAPLN2Q9GZV7 340 aa27.51■■□□□ 1.99
LSM6-202ENST00000502781 CWH43Q9H720 699 aa27.51■■□□□ 1.99
LSM6-202ENST00000502781 TYW1Q9NV66 732 aaKnown RBP27.51■■□□□ 1.99
LSM6-202ENST00000502781 MTMR10Q9NXD2 777 aa27.51■■□□□ 1.99
LSM6-202ENST00000502781 PRPF40AO75400 957 aaKnown RBP27.5■■□□□ 1.99
LSM6-202ENST00000502781 AKAP5P24588 427 aa27.5■■□□□ 1.99
LSM6-202ENST00000502781 LIG4P49917 911 aa27.5■■□□□ 1.99
LSM6-202ENST00000502781 ELOA2Q8IYF1 753 aaPredicted RBP27.5■■□□□ 1.99
LSM6-202ENST00000502781 BICD1Q96G01 975 aa27.5■■□□□ 1.99
LSM6-202ENST00000502781 CCDC34Q96HJ3 373 aa27.5■■□□□ 1.99
LSM6-202ENST00000502781 HCSTQ9UBK5 93 aa27.5■■□□□ 1.99
LSM6-202ENST00000502781 RWDD3Q9Y3V2 267 aa27.5■■□□□ 1.99
LSM6-202ENST00000502781 STYXL1Q9Y6J8 313 aa27.5■■□□□ 1.99
LSM6-202ENST00000502781 C5orf67F2Z3F1 127 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 EIF3DO15371 548 aaKnown RBP eCLIP27.49■■□□□ 1.99
LSM6-202ENST00000502781 CLDN3O15551 220 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 BMPR1AP36894 532 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 GRM5P41594 1212 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 AFF1P51825 1210 aaKnown RBP27.49■■□□□ 1.99
LSM6-202ENST00000502781 NOLC1Q14978 699 aaKnown RBP eCLIP27.49■■□□□ 1.99
LSM6-202ENST00000502781 TMEM192Q8IY95 271 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 CEP120Q8N960 986 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 GSTCDQ8NEC7 633 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 ACCSQ96QU6 501 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 TCHPQ9BT92 498 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 APOL6Q9BWW8 343 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 TBC1D13Q9NVG8 400 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 SNTG2Q9NY99 539 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 ANKFY1Q9P2R3 1169 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 CHD7Q9P2D1 2997 aa27.49■■□□□ 1.99
LSM6-202ENST00000502781 ARL5CA6NH57 179 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 EPOPA6NHQ4 379 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 ANKRD63C9JTQ0 380 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 POSTNQ15063 836 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 KMT5BQ4FZB7 885 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 EPC2Q52LR7 807 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 ZBTB33Q86T24 672 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 ZNF507Q8TCN5 953 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 FAM161BQ96MY7 647 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 GAD1Q99259 594 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 CERS4Q9HA82 394 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 EXOC7Q9UPT5 735 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 MYO9BQ13459 2157 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 CDH23Q9H251 3354 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 RECQL4O94761 1208 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 PRPF6O94906 941 aaKnown RBP27.48■■□□□ 1.99
LSM6-202ENST00000502781 RPN1P04843 607 aaKnown RBP27.48■■□□□ 1.99
LSM6-202ENST00000502781 MLH1P40692 756 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 STXBP4Q6ZWJ1 553 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 ZFP42Q96MM3 310 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 GUCD1Q96NT3 240 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 IKZF4Q9H2S9 585 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 TMEM206Q9H813 350 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 KANSL3Q9P2N6 904 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 PARP2Q9UGN5 583 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 INPP5FQ9Y2H2 1132 aa27.48■■□□□ 1.99
LSM6-202ENST00000502781 A0A0B4J269 797 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 FAM189A1O60320 539 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 RHOBTB3O94955 611 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 RB1P06400 928 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 HOXD13P35453 343 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 PSMD2Q13200 908 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 ARNTL2Q8WYA1 636 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 GBP4Q96PP9 640 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 PLVAPQ9BX97 442 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 EXOC1Q9NV70 894 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 MIOSQ9NXC5 875 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 MTUS1Q9ULD2 1270 aa27.47■■□□□ 1.99
LSM6-202ENST00000502781 TISP43B9A030 160 aa27.46■■□□□ 1.99
LSM6-202ENST00000502781 ADSSP30520 456 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms