RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 GAD1Q99259 594 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 LRFN3Q9BTN0 628 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 FZD8Q9H461 694 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 MIOSQ9NXC5 875 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 IRAK3Q9Y616 596 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 ZMYM2Q9UBW7 1377 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 FAM86C2PA6NEL3 165 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 PP2D1A8MPX8 630 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 E9PMD0 336 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 N4BP3O15049 544 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 DCXO43602 365 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 GPR37L1O60883 481 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 PRKCBP05771 671 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 HOXB8P17481 243 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 LIG1P18858 919 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 AKAP5P24588 427 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 CDC25AP30304 524 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 ATP2C1P98194 919 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 DSC1Q08554 894 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 PRPF4BQ13523 1007 aaKnown RBP9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 CBX2Q14781 532 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 IL17AQ16552 155 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 TPRNQ4KMQ1 711 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 SYCE2Q6PIF2 218 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 SUSD6Q92537 303 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 KIFAP3Q92845 792 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 RPS6KC1Q96S38 1066 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 ADPGKQ9BRR6 497 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 APOL5Q9BWW9 433 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 PHF7Q9BWX1 381 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 VN1R3Q9BXE9 311 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 CCDC113Q9H0I3 377 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 S1PR5Q9H228 398 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 PDZD7Q9H5P4 517 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 C11orf16Q9NQ32 467 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 PARP2Q9UGN5 583 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 DNM3Q9UQ16 869 aa9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 PRG3Q9Y2Y8 225 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-207ENST00000498212 VWA8A3KMH1 1905 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 TTLL13PA6NNM8 815 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 LOC730098B7Z3J9 87 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 ACKR2O00590 384 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 NR1I2O75469 434 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 SOD2P04179 222 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 SSBP05455 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 EFNA5P52803 228 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 ITIH3Q06033 890 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 GRIK3Q13003 919 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 PTPN14Q15678 1187 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 LARP1BQ659C4 914 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 ARL6IP4Q66PJ3 421 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 CES5AQ6NT32 575 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 PPFIBP1Q86W92 1011 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 RNF135Q8IUD6 432 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 GSTCDQ8NEC7 633 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 RPGRIP1Q96KN7 1286 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 MMTAG2Q9BU76 263 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 KIFC3Q9BVG8 833 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 HERC2P3Q9BVR0 1158 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 EMILIN2Q9BXX0 1053 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 NT5C3AQ9H0P0 336 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 POLD4Q9HCU8 107 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 MRPL17Q9NRX2 175 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 MARCH5Q9NX47 278 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 KLK14Q9P0G3 267 aa9.35□□□□□ -0.91
HMGXB4-207ENST00000498212 PHLPP2Q6ZVD8 1323 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 VWA3AA6NCI4 1184 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 CCDC169A6NNP5 214 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 PRR33A8MZF0 331 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 K7ERI5 159 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 HIP1RO75146 1068 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 EDN1P05305 212 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 URODP06132 367 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 EPCAMP16422 314 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 KLRC2P26717 231 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 ZRSR1Q15695 479 aaKnown RBP9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 HERC4Q5GLZ8 1057 aaPredicted RBP9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 HYIQ5T013 277 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 RINT1Q6NUQ1 792 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 KCNK18Q7Z418 384 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 RNF168Q8IYW5 571 aaPredicted RBP9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 SLC22A17Q8WUG5 538 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 DRC1Q96MC2 740 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 KLHL5Q96PQ7 755 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 COLEC11Q9BWP8 271 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 ADAM7Q9H2U9 754 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 DZANK1Q9NVP4 752 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 SNTG2Q9NY99 539 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 DAXXQ9UER7 740 aaPredicted RBP9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 RAPGEFL1Q9UHV5 662 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 MUTYHQ9UIF7 546 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 SSX2IPQ9Y2D8 614 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 USP20Q9Y2K6 914 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 MYO10Q9HD67 2058 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 BDP1A6H8Y1 2624 aa9.34□□□□□ -0.91
HMGXB4-207ENST00000498212 F8W810 466 aa9.33□□□□□ -0.92
HMGXB4-207ENST00000498212 C2CD2LO14523 706 aa9.33□□□□□ -0.92
HMGXB4-207ENST00000498212 MAP3K13O43283 966 aa9.33□□□□□ -0.92
HMGXB4-207ENST00000498212 LILRB3O75022 631 aa9.33□□□□□ -0.92
HMGXB4-207ENST00000498212 RECQL4O94761 1208 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms