RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PROZP22891 400 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 NR2F2P24468 414 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 RAB27AP51159 221 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 OSTNP61366 133 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 LRRC63Q05C16 580 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 DSC3Q14574 896 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 TPD52L1Q16890 204 aaPredicted RBP14.82□□□□□ -0.04
CPNE1-227ENST00000498056 SEZ6Q53EL9 994 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 UBXN11Q5T124 520 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 SLFN12LQ6IEE8 588 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 CHST12Q9NRB3 414 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 FAM105AQ9NUU6 356 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 HSPBP1Q9NZL4 362 aa14.82□□□□□ -0.04
CPNE1-227ENST00000498056 GOLGA8IPA6NC78 632 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 GOLGA8JA6NMD2 632 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 GARTP22102 1010 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 MAGEA10P43363 369 aaPredicted RBP14.81□□□□□ -0.04
CPNE1-227ENST00000498056 MCL1Q07820 350 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 IKBKEQ14164 716 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 ZCWPW2Q504Y3 356 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 CEP135Q66GS9 1140 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 ANKRD40Q6AI12 368 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 CENPPQ6IPU0 288 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 LRSAM1Q6UWE0 723 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 OTOP2Q7RTS6 562 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 THNSL1Q8IYQ7 743 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 AOPEPQ8N6M6 819 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 VWCEQ96DN2 955 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 HAPLN2Q9GZV7 340 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 NAT10Q9H0A0 1025 aaKnown RBP14.81□□□□□ -0.04
CPNE1-227ENST00000498056 TSPYL2Q9H2G4 693 aaPredicted RBP14.81□□□□□ -0.04
CPNE1-227ENST00000498056 TSPY26PQ9H489 355 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 PTPRHQ9HD43 1115 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 C1orf112Q9NSG2 853 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 CGNQ9P2M7 1197 aaKnown RBP14.81□□□□□ -0.04
CPNE1-227ENST00000498056 RWDD2AQ9UIY3 292 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 AGO2Q9UKV8 859 aaKnown RBP14.81□□□□□ -0.04
CPNE1-227ENST00000498056 TRAF3IP3Q9Y228 551 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 HES2Q9Y543 173 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 IPPQ9Y573 584 aa14.81□□□□□ -0.04
CPNE1-227ENST00000498056 A0A0B4J269 797 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 OGTO15294 1046 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 EXOC3O60645 756 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 BAIAP3O94812 1187 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 ADSSP30520 456 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 KCNJ6P48051 423 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 EPHB4P54760 987 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 SNRPFP62306 86 aaKnown RBP14.8□□□□□ -0.04
CPNE1-227ENST00000498056 EDRF1Q3B7T1 1238 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 ZBTB41Q5SVQ8 909 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 TTI2Q6NXR4 508 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 ZNF365Q70YC5 407 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 C12orf56Q8IXR9 622 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 HACE1Q8IYU2 909 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 GPD1LQ8N335 351 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 CSGALNACT2Q8N6G5 542 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 EEF2KMTQ96G04 330 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.8□□□□□ -0.041e-8■□□□□ 8.3
CPNE1-227ENST00000498056 FAM213AQ9BRX8 229 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 CCDC94Q9BW85 323 aaPredicted RBP14.8□□□□□ -0.04
CPNE1-227ENST00000498056 RGS18Q9NS28 235 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 PCDHB2Q9Y5E7 798 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 STYXL1Q9Y6J8 313 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 COL4A6Q14031 1691 aa14.8□□□□□ -0.04
CPNE1-227ENST00000498056 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.79□□□□□ -0.04
CPNE1-227ENST00000498056 EFCAB14O75071 495 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 FGBP02675 491 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 CXCL8P10145 99 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 SKIP12755 728 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 RPL13P26373 211 aaKnown RBP14.79□□□□□ -0.04
CPNE1-227ENST00000498056 ERCC5P28715 1186 aaPredicted RBP14.79□□□□□ -0.04
CPNE1-227ENST00000498056 TNFSF9P41273 254 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 ACOT2P49753 483 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 ZNF445P59923 1031 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 WDR5P61964 334 aaKnown RBP14.79□□□□□ -0.04
CPNE1-227ENST00000498056 MYL5Q02045 173 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 SLC24A5Q71RS6 500 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 XXYLT1Q8NBI6 393 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 ZSWIM2Q8NEG5 633 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 LPPQ93052 612 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 SNTG2Q9NY99 539 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 PARP2Q9UGN5 583 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 LRFN2Q9ULH4 789 aa14.79□□□□□ -0.04
CPNE1-227ENST00000498056 A0A0U1RQF3 1178 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 ABHD14A-ACY1A0A1B0GW23 586 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 C9IYK1 514 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 H0YGN5 161 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 KIAA0391O15091 583 aaKnown RBP14.78□□□□□ -0.04
CPNE1-227ENST00000498056 CETN3O15182 167 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 FAM189A1O60320 539 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 RECQL4O94761 1208 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 AMHP03971 560 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 ADRB2P07550 413 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 STAG3L1P0CL83 205 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 EPB41P11171 864 aaKnown RBP14.78□□□□□ -0.04
CPNE1-227ENST00000498056 ITGA4P13612 1032 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 ATF7P17544 494 aaPredicted RBP14.78□□□□□ -0.04
CPNE1-227ENST00000498056 AKAP5P24588 427 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 GRM5P41594 1212 aa14.78□□□□□ -0.04
CPNE1-227ENST00000498056 RGS19P49795 217 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms